BS33311.complete Sequence
1439 bp assembled on 2014-01-24
GenBank Submission: KX803756
> BS33311.complete
GAAGTTATCAGTCGACATGGATATCAGCTATATCTTCGTCATCTGCCTGA
TGGCCCTGTGCAGCGGCGGCAGCAGTCTCAGCCAAGTCGAGGGCAAACAG
AAATCCGGAAGGGGCCGGGGCTCCATGTGGTGGGGCATTGCCAAGGTCGG
CGAACCCAACAACATTACGCCCATCATGTACATGGACCCAGCGATCCACT
CTACGTTGAGAAGGAAACAGCGACGCCTGGTCAGGGACAATCCCGGTGTA
CTGGGAGCCCTGGTCAAGGGCGCCAACTTGGCCATTAGCGAGTGCCAACA
CCAGTTCAGAAATCGCCGCTGGAACTGCTCGACGAGAAACTTCTCGAGGG
GCAAAAATCTATTCGGCAAAATCGTTGATCGAGGCTGCCGAGAGACGAGC
TTCATTTACGCAATCACCAGCGCGGCGGTGACCCACTCGATTGCCAGGGC
CTGCAGTGAAGGAACGATAGAGTCCTGCACCTGCGACTACAGCCACCAGT
CGAGATCTCCACAAGCGAACCACCAGGCGGGCAGTGTGGCCGGCGTGCGG
GATTGGGAGTGGGGCGGCTGCTCCGACAACATCGGATTCGGGTTCAAGTT
CTCCCGGGAATTCGTCGATACCGGCGAGAGGGGTCGCAATCTGCGCGAGA
AGATGAATCTGCACAACAACGAGGCGGGTCGAGCGCACGTCCAAGCGGAG
ATGCGACAGGAGTGCAAATGCCATGGCATGTCCGGATCGTGTACAGTGAA
GACCTGCTGGATGCGACTGGCCAACTTCCGTGTGATTGGCGACAATCTGA
AGGCCCGCTTCGATGGAGCCACCCGCGTGCAAGTGACCAACAGTCTCCGG
GCCACCAACGCTCTGGCCCCAGTTAGTCCGAATGCAGCCGGCTCGAATTC
CGTGGGCTCCAACGGCCTGATTATTCCGCAGTCTGGTCTGGTCTACGGCG
AGGAGGAGGAGCGTATGCTGAACGACCATATGCCGGACATCCTGCTAGAG
AACAGCCACCCGATCAGCAAGATCCATCACCCGAACATGCCGTCGCCCAA
CAGTTTGCCCCAGGCTGGTCAAAGGGGCGGACGAAATGGACGTCGTCAGG
GACGCAAGCATAATAGATATCACTTCCAACTGAACCCGCACAATCCCGAG
CACAAGCCACCCGGCTCGAAGGACCTTGTCTATCTGGAGCCTTCGCCGAG
CTTCTGCGAGAAGAACCTGCGGCAGGGCATCCTGGGAACCCATGGCCGCC
AGTGCAATGAGACCTCGCTGGGCGTCGACGGCTGTGGGCTGATGTGCTGT
GGGCGTGGCTATCGGCGAGACGAGGTCGTCGTTGTGGAGCGGTGCGCCTG
CACCTTCCACTGGTGCTGCGAGGTGAAGTGCAAGCTGTGTCGGACCAAAA
AGGTCATCTACACGTGTCTGTAAAAGCTTTCTAGACCAT
BS33311.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:55:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-RA | 1407 | CG4889-PA | 1..1407 | 17..1423 | 7035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:55:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-RA | 2919 | CG4889-RA | 434..1840 | 17..1423 | 7035 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:55:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7314317..7314748 | 685..1116 | 2160 | 100 | Plus |
| 2L | 23513712 | 2L | 7314878..7315186 | 1115..1423 | 1545 | 100 | Plus |
| 2L | 23513712 | 2L | 7312836..7313139 | 382..685 | 1520 | 100 | Plus |
| 2L | 23513712 | 2L | 7309385..7309637 | 132..384 | 1265 | 100 | Plus |
| 2L | 23513712 | 2L | 7307592..7307708 | 17..133 | 585 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:55:33 has no hits.
BS33311.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:35 Download gff for
BS33311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wg-RA | 434..1838 | 17..1421 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:51 Download gff for
BS33311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wg-RA | 434..1838 | 17..1421 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:51 Download gff for
BS33311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7307592..7307707 | 17..132 | 100 | -> | Plus |
| 2L | 7309386..7309636 | 133..383 | 100 | -> | Plus |
| 2L | 7312838..7313139 | 384..685 | 100 | -> | Plus |
| 2L | 7314318..7314748 | 686..1116 | 100 | -> | Plus |
| 2L | 7314880..7315184 | 1117..1421 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:35 Download gff for
BS33311.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7307592..7307707 | 17..132 | 100 | -> | Plus |
| arm_2L | 7309386..7309636 | 133..383 | 100 | -> | Plus |
| arm_2L | 7312838..7313139 | 384..685 | 100 | -> | Plus |
| arm_2L | 7314318..7314748 | 686..1116 | 100 | -> | Plus |
| arm_2L | 7314880..7315184 | 1117..1421 | 100 | | Plus |
BS33311.pep Sequence
Translation from 16 to 1422
> BS33311.pep
MDISYIFVICLMALCSGGSSLSQVEGKQKSGRGRGSMWWGIAKVGEPNNI
TPIMYMDPAIHSTLRRKQRRLVRDNPGVLGALVKGANLAISECQHQFRNR
RWNCSTRNFSRGKNLFGKIVDRGCRETSFIYAITSAAVTHSIARACSEGT
IESCTCDYSHQSRSPQANHQAGSVAGVRDWEWGGCSDNIGFGFKFSREFV
DTGERGRNLREKMNLHNNEAGRAHVQAEMRQECKCHGMSGSCTVKTCWMR
LANFRVIGDNLKARFDGATRVQVTNSLRATNALAPVSPNAAGSNSVGSNG
LIIPQSGLVYGEEEERMLNDHMPDILLENSHPISKIHHPNMPSPNSLPQA
GQRGGRNGRRQGRKHNRYHFQLNPHNPEHKPPGSKDLVYLEPSPSFCEKN
LRQGILGTHGRQCNETSLGVDGCGLMCCGRGYRRDEVVVVERCACTFHWC
CEVKCKLCRTKKVIYTCL*
BS33311.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wg-PA | 468 | CG4889-PA | 1..468 | 1..468 | 2557 | 100 | Plus |
| Wnt10-PB | 483 | CG4971-PB | 82..482 | 64..467 | 584 | 31.1 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 13..214 | 68..278 | 466 | 41.2 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 40..241 | 68..278 | 466 | 41.2 | Plus |
| Wnt4-PB | 539 | CG4698-PB | 239..434 | 58..270 | 393 | 38.1 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 212..324 | 355..467 | 236 | 37.2 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 239..351 | 355..467 | 236 | 37.2 | Plus |
