BS33313.complete Sequence
1196 bp assembled on 2014-07-18
GenBank Submission: KX800689
> BS33313.complete
GAAGTTATCAGTCGACATGGCAAAACAATATGGCCTTATTTTACCCGGCC
AACAGAAGAAAGTACCTCTAAAACGAGTCGAAAGGCCCTCCATCTTCGAC
GAGAACAGCGACTCCGAGACCGATGATGACCCAGCTGCTCCTCAATTTCA
GCCAAGAACCGGCGGCGTATCCATGGGTCCTAGTCTAATGGAACGCCGCG
TGGCCCGCCGGCAGCAGGAGAAGGCCCTGGCCGAGGATCCAACCATATTC
CAGTACGACGAGCTGTACGATGACATGGACAGCAAACGCGAGGAGGCCAA
GCAGACGAAGAGCCAGGAGCCGCGGAAACCAAAGTACATTGGTCGGCTGA
TGGAGCATGCCGAGCGCAGAAAGCTGGAGAAGGAGCTGCGCATCGAACGG
CAGGTGCAGAAGGATCGCGAAGCCGAGGGCGAGATGTATAAGGACAAGGA
CACCTACGTGACTGCCGCCTACCGCAAGAAGCTCGAGTCCATACGCCAGA
TGCAGGAGCAGGAGCAGCGTGATGAGTACCTCGAGGCCATTGGCGATGTG
ACCAAGCAAAAGGATCTGGACGGCTTCTATCGCCATCTATACGAACAAAA
GTTGGGCGGTCCCGCCCAGCAGGATGTCGTCAAGCCAAAGACGGCGCCCA
CCACCGACGAGGTGGCATACAAACCCATTAAGGCAGAGGCTGTCAAGCAT
CGAAGCTATCGGCGACGTCGCCCCTCCGAGGATGAAGAGGAGCAGACTAA
GAGCAAATCAGACGCAGCCTCGGACGCCACGAAGTCAACGGATCAAACGG
AAAGCATACCAGCGCAGGCACATTTGACCAACAACATAGATGCCGATTCT
GATTTTAGCATAGACGACTCCAGCGATGAAGAAGACGAGAAGGAGAATGA
GAAGGAAAAGAATAAGCTGTCCCAGATCAAAAAGGAGGATAAGGACAAGG
CTCCGGAAAGTTCAGAGCCCGTTAAACCCAAAGAACCCGAGGCCTCGCAA
CAATCCCCCACCAAAAAGGATGATTCCAATGCCGAAGTGAACGAAAAGGA
TCTACCCGTGCCGAGAGTCACCAAACCGCCTGTGGATCGCACACTCTTCT
GGCGCAAGAGGACCGTGGGCGAGGTCCTAGCGGCAGCCTTGGCTCGCTAC
GAGGAACGCAAGCGAGCGCGCCTCCAGTAAAAGCTTTCTAGACCAT
BS33313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:14:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15747-RC | 1164 | CG15747-PC | 1..1164 | 17..1180 | 5805 | 99.9 | Plus |
| CG15747-RA | 1164 | CG15747-PA | 1..1164 | 17..1180 | 5805 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15747-RC | 2536 | CG15747-RC | 58..1223 | 17..1182 | 5815 | 99.9 | Plus |
| CG15747-RA | 2626 | CG15747-RA | 58..1223 | 17..1182 | 5815 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13338452..13339606 | 28..1182 | 5760 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:14:03 has no hits.
BS33313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-18 11:09:20 Download gff for
BS33313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15747-RA | 58..1219 | 17..1178 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:18 Download gff for
BS33313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15747-RA | 58..1219 | 17..1178 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:18 Download gff for
BS33313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13338452..13339602 | 28..1178 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-18 11:09:20 Download gff for
BS33313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13232485..13233635 | 28..1178 | 99 | | Plus |
BS33313.pep Sequence
Translation from 16 to 1179
> BS33313.pep
MAKQYGLILPGQQKKVPLKRVERPSIFDENSDSETDDDPAAPQFQPRTGG
VSMGPSLMERRVARRQQEKALAEDPTIFQYDELYDDMDSKREEAKQTKSQ
EPRKPKYIGRLMEHAERRKLEKELRIERQVQKDREAEGEMYKDKDTYVTA
AYRKKLESIRQMQEQEQRDEYLEAIGDVTKQKDLDGFYRHLYEQKLGGPA
QQDVVKPKTAPTTDEVAYKPIKAEAVKHRSYRRRRPSEDEEEQTKSKSDA
ASDATKSTDQTESIPAQAHLTNNIDADSDFSIDDSSDEEDEKENEKEKNK
LSQIKKEDKDKAPESSEPVKPKEPEASQQSPTKKDDSNAEVNEKDLPVPR
VTKPPVDRTLFWRKRTVGEVLAAALARYEERKRARLQ*
BS33313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15747-PC | 387 | CG15747-PC | 1..387 | 1..387 | 1983 | 100 | Plus |
| CG15747-PA | 387 | CG15747-PA | 1..387 | 1..387 | 1983 | 100 | Plus |
| sls-PY | 10625 | CG1915-PY | 5861..6229 | 12..371 | 165 | 21.7 | Plus |
| sls-PS | 15481 | CG1915-PS | 5861..6229 | 12..371 | 165 | 21.7 | Plus |
| sls-PU | 15953 | CG1915-PU | 5861..6229 | 12..371 | 165 | 21.7 | Plus |
