BS33317.complete Sequence
1925 bp assembled on 2014-07-07
GenBank Submission: KX801065
> BS33317.complete
GAAGTTATCAGTCGACATGGAGGGCGCTGTTAAGAAAAACAGTTTGAACT
CTTCGCCATTGCCACAACGCCAGCAGAGGGGCAATTCGACCAATAAGAAC
CTGGGCAAGCCAACGCCCCCGAAGCTAAATGCTGCCAGCGACGGTAATCC
TGCCGAGAAAAAGGCAAGACTTGGAGGAAACACCCAGAACGGTGGTGGAG
TAGCTGGTGGCGGCGGCACTGGCGGTGGTGGTGGTGGTGGTGGTGCTACT
GGCGGCGTTGAATTTTCCAGAAATCGCAATCGAGGCGGCAACCAAAATGA
AAACCGGCAGGGTTTCCAAGTCGCAAATAATTCACATCAAAAGCAGATTA
ACGAATCGCCGAAGCCGGCTGCGGGCAATGTGCCCGCAAAGAACAATGAA
CTCTCAGCTGGCGGAGGTGGTCAAAACCAGCCGAACCATAGTAACAAGGG
CCAGGGTAACCAAGGCGATCAAGGAGAACAGGGAAACCAAGGACCGAATT
TCAGAGGTCGTGGTGGTGGCCCAAATCAGCCGAATCAGAATGCCAACCAG
GAGCAAAGCAATGGATATCCCGGCAACCAAGGAGACAATAAAGGAGGACA
GGGCCAACGCGGTGCTGGAGGTGGAAAACACCAGCGTGGAAACCGCTCTA
GGCGCTCTGGGGGATCTGGAATCATGAACTCATCAATGGGCGGCGGTGGG
CAGCGCGGCGAAGACTTTTTCATTGCCCAACGACTGCTCGACATTAGTGG
ACCCACCCATGAGTTGCCGCCCATTGAGTTACCCACCGATAACAAATTCG
TCGGACGCAACCGCTTATATGTTGGCAACCTCACCAGCGACACAACTGAT
GACGACCTACGGGAGATGTTCAAGCCATATGGCGAGATCGGCGATATATT
CTCGAACCCGGAGAAGAACTTTACATTCCTGAGGCTAGACTACTACCAAA
ATGCTGAGAAGGCCAAACGCGCTTTAGATGGCTCCTTGCGCAAGGGACGA
GTGCTGCGTGTCCGCTTTGCGCCCAACGCCATTGTGCGTGTGACTAATCT
CAACCAGTTCGTGTCCAACGAGCTGCTGCACCAGTCCTTTGAGATCTTTG
GACCCATCGAGCGCGCCGTTATCTGCGTAGACGATCGCGGTAAGCATACC
GGCGAAGGCATTGTTGAGTTCGCCAAGAAGTCCTCGGCCAGCGCCTGTCT
GCGCCTGTGCAACGAAAAATGCTTCTTCTTGACTGCTTCATTGCGTCCGT
GTCTGGTGGAACCGATGGAGGTGAACAACGACAATGACGGCTTGCCGGAT
AAGACGTTAAACAAAAAGTCGCTGGAATTCAGACATGAGCGTAGTGTCGG
ACCGCGTTTCGCTTGTTTAAATTCGTTTGAGCACGAGTATGGATCACGCT
GGAAGCAATTGCACGATCTCTTCAAGAGCAAACAGGACTCACTCAAGCGT
GAGTTGAAAATGGAGGAGGACAAGCTGGAGGCCCAGATGGAGTACGCTCG
CTACGAACAGGAGACCGAACTGCTGCGCCAGGAGCTGAAGAAGCGCGAGC
TGGACAACGAGCGCATGAAACTGGAGTGGGAGATGCGTGAGAAACAAGCC
GAGGAGATTCGAAAGCGGGAAGAGGAATACATGCATCGTTATCAAAACCA
ATTACTTCGCCATGAGGAGGATATGCGAGCCCGTCAGCAGGAGAACGATT
TGCTAATGCAGGCCAAGAAACTCAACATGATCCTCGATCAGCAGGAGGGA
TTCGGAGGCAGCAACTCTGGATTCGAACACTTTGATTCCCCTTTTGAAGT
ATTTGGGAACAACAGCAACAATTCAACAATGGCTGGACCTGGAGGTCCAG
ATAATAGCGACGGAAACCAACACGGACACATTGATTCATGGGGACACCGA
CGCTTCTAGAAGCTTTCTAGACCAT
BS33317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:11:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nonA-l-RB | 1893 | CG10328-PB | 1..1893 | 17..1909 | 9465 | 100 | Plus |
| nonA-l-RA | 1893 | CG10328-PA | 1..1893 | 17..1909 | 9465 | 100 | Plus |
| nonA-RD | 2103 | CG4211-PD | 913..1724 | 818..1626 | 1505 | 79.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nonA-l-RB | 2908 | CG10328-RB | 123..2017 | 16..1910 | 9475 | 100 | Plus |
| nonA-l-RA | 2569 | CG10328-RA | 123..2017 | 16..1910 | 9475 | 100 | Plus |
| nonA-RD | 6746 | CG4211-RD | 1042..1853 | 818..1626 | 1505 | 79.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:11:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 16640327..16642221 | 16..1910 | 9475 | 100 | Plus |
| X | 23542271 | X | 16363913..16364625 | 818..1527 | 1280 | 79 | Plus |
| 3L | 28110227 | 3L | 24535176..24535435 | 1008..1267 | 505 | 79.6 | Plus |
| 2R | 25286936 | 2R | 4731528..4731686 | 1126..1283 | 325 | 81.8 | Plus |
| X | 23542271 | X | 16365225..16365298 | 1553..1626 | 235 | 87.8 | Plus |
Blast to na_te.dros performed 2014-11-28 15:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| jockey | 5020 | jockey DMLINEJA 5020bp Derived from M22874 (g157823) (Rel. 47, Last updated, Version 5). | 678..754 | 1000..920 | 115 | 65.4 | Minus |
BS33317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-07 10:51:57 Download gff for
BS33317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nonA-l-RA | 124..2016 | 17..1909 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:33:10 Download gff for
BS33317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nonA-l-RA | 124..2016 | 17..1909 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:33:10 Download gff for
BS33317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 16640328..16642220 | 17..1909 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-07 10:51:57 Download gff for
BS33317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 12466050..12467942 | 17..1909 | 100 | | Plus |
BS33317.pep Sequence
Translation from 16 to 1908
> BS33317.pep
MEGAVKKNSLNSSPLPQRQQRGNSTNKNLGKPTPPKLNAASDGNPAEKKA
RLGGNTQNGGGVAGGGGTGGGGGGGGATGGVEFSRNRNRGGNQNENRQGF
QVANNSHQKQINESPKPAAGNVPAKNNELSAGGGGQNQPNHSNKGQGNQG
DQGEQGNQGPNFRGRGGGPNQPNQNANQEQSNGYPGNQGDNKGGQGQRGA
GGGKHQRGNRSRRSGGSGIMNSSMGGGGQRGEDFFIAQRLLDISGPTHEL
PPIELPTDNKFVGRNRLYVGNLTSDTTDDDLREMFKPYGEIGDIFSNPEK
NFTFLRLDYYQNAEKAKRALDGSLRKGRVLRVRFAPNAIVRVTNLNQFVS
NELLHQSFEIFGPIERAVICVDDRGKHTGEGIVEFAKKSSASACLRLCNE
KCFFLTASLRPCLVEPMEVNNDNDGLPDKTLNKKSLEFRHERSVGPRFAC
LNSFEHEYGSRWKQLHDLFKSKQDSLKRELKMEEDKLEAQMEYARYEQET
ELLRQELKKRELDNERMKLEWEMREKQAEEIRKREEEYMHRYQNQLLRHE
EDMRARQQENDLLMQAKKLNMILDQQEGFGGSNSGFEHFDSPFEVFGNNS
NNSTMAGPGGPDNSDGNQHGHIDSWGHRRF*
BS33317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nonA-l-PB | 630 | CG10328-PB | 1..630 | 1..630 | 3367 | 100 | Plus |
| nonA-l-PA | 630 | CG10328-PA | 1..630 | 1..630 | 3367 | 100 | Plus |
| nonA-PD | 700 | CG4211-PD | 1..700 | 1..630 | 1879 | 60 | Plus |
| nonA-PA | 700 | CG4211-PA | 1..700 | 1..630 | 1879 | 60 | Plus |
| nonA-PC | 698 | CG4211-PC | 1..669 | 1..619 | 1868 | 61.3 | Plus |
