BS33324.complete Sequence
1196 bp assembled on 2014-01-24
GenBank Submission: KX806204
> BS33324.complete
GAAGTTATCAGTCGACATGAAACCCGCTGCGATTCCGGCTAGCGAGCGGC
GTCTGGCCTTCGTGGCCGAGTGGTTCCATGCAGAGGCTGGAATCATACGC
ACCTTTCTGATCACCTACTATGTATCCGACAAGGCCGTGGAAGTGTTCGA
CCAGCGCAACAAGCGCACATTTCTGCGACGCACCAAGATCCCGGAGCTGA
CCCAGCGCGACTTCTTTGTGGGCTCCAAGATCAATGTCTTTGGCCGGCAG
TTTGACATTGTGGATTATGCTGACGACACTACGCGGACAAACCTAGCCAA
ATATCGCAAGAAGGGATTCGTTTTGCTCAAGAACAATATGTGGACGAAGC
ACCTGGGCAAGTTCCTAAAGACTCTGATCGACAACAAGATTAACATAAAC
CAGGGCATGATGGTTCAGTTCTCTCCCAAAATGGTAACTCAGTTTCTGTC
CGGCAAGGACACGACGGATGTCTCCTCTTCAGTCCTTATGAACGAGCTGC
TGGCTGGTCCGGCCATTAGTCTGGAGCTAATCGGCGACAACGTAGTGGAG
ACCATCAAGGCCTGCGCCCAGTACAAGAGCACAGAGGCGGAAACACCCAG
TGTGAAACTGTCGCCCAGTTTGGAAGAGCTGTTTGAAAGTGAGGAGATTC
GTTATGGATTTTACTACTCTGATAACGACAACGACGTGGAAATGGACCTA
AAGTTCATATCTGAGGCGAGGCACAGCATAATTAAAGAATGTGTATTCAA
GAATACAACACTTGCCATCATTAAGCCGCACAGCATCAAGGATGGTCTCC
TGGGAGACATCATTTCCGAAATCCTGTCGAATGGCTTTCGGTTGACAGCC
ATGCGCATGATTCTAATGGCCCGAATCAACTGCGAGGAGTTCTACGAAGT
CTACCGCGGAGTGGTGCCCGAGTATATACCCATGGTTGCTCAGTTGGCCA
GTGGAGTATGCATGTGCATGGAGATTGCTTGCGCCGATCCCGAAAAGAAA
ACTGATCGCGAGTTCCGCAACTTCTGTGGACCCATGGATCCGGAGATCGC
CAAACTGTTGCGGCCTCACACGCTGCGCGCCAAGTTCGGCAAGTCCAAGG
TGCAGAACGCCGTCCACTGCACTGATCTGCCAGATGACTCCAACCTGGAG
CTGCAGTATATGTTCAAGATAATCGACTGAAAGCTTTCTAGACCAT
BS33324.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:54:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nmdyn-D7-RA | 1164 | CG8362-PA | 1..1164 | 17..1180 | 5820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:54:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nmdyn-D7-RA | 1392 | CG8362-RA | 142..1306 | 16..1180 | 5825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9680717..9681416 | 481..1180 | 3500 | 100 | Plus |
| 3R | 32079331 | 3R | 9680273..9680441 | 145..313 | 845 | 100 | Plus |
| 3R | 32079331 | 3R | 9680499..9680666 | 313..480 | 840 | 100 | Plus |
| 3R | 32079331 | 3R | 9680080..9680209 | 16..145 | 650 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 14:54:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| flea | 5034 | flea DMBLPP 5034bp Derived from Z27119 (g415797) (Rel. 50, Last updated, Version 6). | 1768..1830 | 725..788 | 137 | 72.3 | Plus |
BS33324.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:02 Download gff for
BS33324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nmdyn-D7-RA | 143..1305 | 17..1179 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:17 Download gff for
BS33324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nmdyn-D7-RA | 143..1305 | 17..1179 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:17 Download gff for
BS33324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9680081..9680209 | 17..145 | 100 | -> | Plus |
| 3R | 9680274..9680440 | 146..312 | 100 | -> | Plus |
| 3R | 9680499..9680666 | 313..480 | 100 | -> | Plus |
| 3R | 9680717..9681415 | 481..1179 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:02 Download gff for
BS33324.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5506439..5507137 | 481..1179 | 100 | | Plus |
| arm_3R | 5505803..5505931 | 17..145 | 100 | -> | Plus |
| arm_3R | 5505996..5506162 | 146..312 | 100 | -> | Plus |
| arm_3R | 5506221..5506388 | 313..480 | 100 | -> | Plus |
BS33324.pep Sequence
Translation from 16 to 1179
> BS33324.pep
MKPAAIPASERRLAFVAEWFHAEAGIIRTFLITYYVSDKAVEVFDQRNKR
TFLRRTKIPELTQRDFFVGSKINVFGRQFDIVDYADDTTRTNLAKYRKKG
FVLLKNNMWTKHLGKFLKTLIDNKININQGMMVQFSPKMVTQFLSGKDTT
DVSSSVLMNELLAGPAISLELIGDNVVETIKACAQYKSTEAETPSVKLSP
SLEELFESEEIRYGFYYSDNDNDVEMDLKFISEARHSIIKECVFKNTTLA
IIKPHSIKDGLLGDIISEILSNGFRLTAMRMILMARINCEEFYEVYRGVV
PEYIPMVAQLASGVCMCMEIACADPEKKTDREFRNFCGPMDPEIAKLLRP
HTLRAKFGKSKVQNAVHCTDLPDDSNLELQYMFKIID*
BS33324.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nmdyn-D7-PA | 387 | CG8362-PA | 1..387 | 1..387 | 1997 | 100 | Plus |
