BS33326.complete Sequence
1301 bp assembled on 2014-01-24
GenBank Submission: KX801935
> BS33326.complete
GAAGTTATCAGTCGACATGAAGCCGGAGGACCAGAACAACTTTTCTCAGA
ATTCGCGATCCTCTCCAGATTCCAGCACTGAGAACAATTCGAGCAGCAGT
GATTCGGAAATGGAATTTGTGGGCACAAGTGCACGGGGAATGCTGAAACA
TAAGAAAAAAGATGAGAGGAAAATATCGGAACTCACCCGAAAGTTGGCGG
AGGCTGAAATAAATCTGAAGGCCCAACAGGAGAAGGGCAGTATACTTGAA
AACTGCATCAAGGATAAGGATGATTTTATTAAGACCCTGCAATTGTCGAT
TGACTTAGTAACGCAAACAAAAGAAATGACCATACAGAAGTTACAAACTC
AAATTATGGACTTGCAAAGTGATCTCGACTTGAGTAGGATTACAATTAAG
AAGAACGATGGAGGAAATTGTGCTCCAGCGCATGATAAAGTTGTGAAAGA
ACGAAAGGAGTTAAATATGGAAAATGGAAAATTTCGAGAGGGGAATGATC
AGATTGTTGAAATCGAGAAAATTTTGAACTCAAAAGAGGCGGAAATCGCC
AGACTAGAATTCAAAATTGACGAGTCGAAGCTAAAAATTGTGCAATTGGA
AGGTGCAGTAAAGGCGAAGGACGAAAAGATAGTGAAAATGACAGAGATAT
TGTCTGAGTATAACGTTAATAATAAGGACCACGATGAATTCGTATTACTG
GGCTCTTCCAAGTTGCCTTCAATTAAATTGGTGACACTACCTGATTTCGA
ACCCTTTGCCTCAGTTTTCGAGGATATTCCTTCTGCCGGTCGTGGTTGGA
TGATAATCCAGCGTAGAATCGATGGCAGTTTCGATAACGCCACTGAATCA
AATATAATAACGGGCTGTGGGGATTTGGGTGGCGAGTTCTGGCTTGGCCT
ACAAAAATTGCATAAAATGACGACACATCGACGAATGGAACTATATATCC
AGCTCGTCGATTTCGACAATGCTAGTGCTTATGCAAGATATGATAATTTT
GTTATTGGCGATGAAAAACAGAAATACAAACTGCTTTCCCTTGGCGAATA
CTCAGGAAATGCTGGCGACGCATTTCGCAGTCATATAAACCATATTATTG
TTGGAAATCCGTTTGCAATGGAATCATCGAAATGGTGGGGTACAATGAAC
TGTAACTTGAACGGAAAATATCGGAATTCCAAAGTTGAGTTGGACACGAC
CGATGGCATTTGGTGGGGTAATTGGAATGTTGGTAATAGATATCCCCTGA
AGTCGTGCAAAATGCTAATCAGACCAATGCCGTGAAAGCTTTCTAGACCA
T
BS33326.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:54:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7668-RC | 1269 | CG7668-PC | 1..1269 | 17..1285 | 6345 | 100 | Plus |
| CG7668-RA | 1269 | CG7668-PA | 1..1269 | 17..1285 | 6345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:54:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7668-RC | 1736 | CG7668-RC | 182..1451 | 16..1285 | 6350 | 100 | Plus |
| CG7668-RA | 1506 | CG7668-RA | 182..1451 | 16..1285 | 6350 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:54:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20003302..20004363 | 91..1152 | 5310 | 100 | Plus |
| 3L | 28110227 | 3L | 20004416..20004549 | 1152..1285 | 670 | 100 | Plus |
| 3L | 28110227 | 3L | 20002917..20002992 | 16..91 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:54:40 has no hits.
BS33326.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:12 Download gff for
BS33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7668-RA | 183..1450 | 17..1284 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:27 Download gff for
BS33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7668-RA | 183..1450 | 17..1284 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:27 Download gff for
BS33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20002918..20002992 | 17..91 | 100 | -> | Plus |
| 3L | 20003303..20004363 | 92..1152 | 100 | -> | Plus |
| 3L | 20004417..20004548 | 1153..1284 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:12 Download gff for
BS33326.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19996018..19996092 | 17..91 | 100 | -> | Plus |
| arm_3L | 19996403..19997463 | 92..1152 | 100 | -> | Plus |
| arm_3L | 19997517..19997648 | 1153..1284 | 100 | | Plus |
BS33326.pep Sequence
Translation from 16 to 1284
> BS33326.pep
MKPEDQNNFSQNSRSSPDSSTENNSSSSDSEMEFVGTSARGMLKHKKKDE
RKISELTRKLAEAEINLKAQQEKGSILENCIKDKDDFIKTLQLSIDLVTQ
TKEMTIQKLQTQIMDLQSDLDLSRITIKKNDGGNCAPAHDKVVKERKELN
MENGKFREGNDQIVEIEKILNSKEAEIARLEFKIDESKLKIVQLEGAVKA
KDEKIVKMTEILSEYNVNNKDHDEFVLLGSSKLPSIKLVTLPDFEPFASV
FEDIPSAGRGWMIIQRRIDGSFDNATESNIITGCGDLGGEFWLGLQKLHK
MTTHRRMELYIQLVDFDNASAYARYDNFVIGDEKQKYKLLSLGEYSGNAG
DAFRSHINHIIVGNPFAMESSKWWGTMNCNLNGKYRNSKVELDTTDGIWW
GNWNVGNRYPLKSCKMLIRPMP*
BS33326.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7668-PC | 422 | CG7668-PC | 1..422 | 1..422 | 2194 | 100 | Plus |
| CG7668-PA | 422 | CG7668-PA | 1..422 | 1..422 | 2194 | 100 | Plus |
| CG8642-PB | 429 | CG8642-PB | 67..412 | 57..420 | 343 | 30.1 | Plus |
| CG6788-PA | 358 | CG6788-PA | 99..355 | 178..420 | 312 | 33.5 | Plus |
| CG30281-PA | 291 | CG30281-PA | 24..273 | 183..420 | 284 | 34 | Plus |
