BS33328.complete Sequence
1382 bp assembled on 2014-07-18
GenBank Submission: KX804948
> BS33328.complete
GAAGTTATCAGTCGACATGAATGGGTCCTGGAAACTAATCCTGCCCGTGG
GCTTTGTGCTGTACTCGCTGCCACTTTTCCTGCGGGTGAATGGCACATCG
GACTATGTAATCGACGAGGAGTTCCACATTCCGCAGGGATTGGCCTTTTG
CCGCAAGGAATTCGATGTGTGGGATCCCAAGATAACAACATTTCCGGGCC
TCTATCTGATCGCCCTGCTCCTGAATCCCCTAAGTCTGTGCACGGTGACG
GGCCTGAGGATGCTCAGCCTAGCAGGTGCCGGCATCAATATTCTGCTGCT
CTACAAGATCAGACGGCGCATCCTGGCCGGCTCGGGTGGCAACTCATATG
CCGCCCATGAGGCTATCACCATGTCCGTGCTTCCGCCGCTCTACTTCTTT
AGCCACCTTTACTACACGGACACCTTGTCGCTGACCATGGTGCTTCTGTT
CTACAACTATTGGCAGCAGGAGGCGCACCTGCCGGCGGCGGTCTTTGGGG
CTGCCAGTGTGCTTATGCGCCAGACGAATATCGTGTGGGTATGCATGGCC
ACCGGAATGACTGTGCTGGACACGTTGGTCAATCAATGCGCCCGCACTGG
GCGCGTTCCCAAGGAAAATGTTCGACTGATGGGCAAAGAGTTGTGGCTTC
AACTCGTTAGCAGCCCCCAATTGCTGTGCAATTGCATCCTGAGCATCTTG
GCCAAGTGCTGTTTCTACGCTTCGATCATTCTGCCGTTCGTGGGATTCCT
CTTCATCAATGGTTCCATTGTGGTGGGCGACAAGAGTGCCCACGAGGCCA
GTTTGCATGTGCCGCAGCTATTCTACTTCGCCATCTTTGCGGCTGGCTTT
GGGATATCCAACACCATACGTCAGTTTCGTCCGGCAGCAGAATTAATACG
CAGGAATCGCGTGCTGTCCCTATTGGCATTGCTGCTCATACTGGTGGTGG
TGCACCTAAACACCGAAGTGCATCCCTACCTGCTGGCTGACAACAGACAC
TATACATTCTATATATGGAGCCGACTTTATGGACGGTTCTGGTGGTTCCG
CTACGCCATGGCGCCCGCTTATCTGCTCTCGATTTGCGTACTCTTTTGCG
GACTACGTCACATGCCGGAAAGCTTTAAGTTAATGTTTCCACTTAGTCTA
TTCCTGGTGCTGTGCTTCCAGCGACTCCTGGAGCTGCGCTACTTCCTGGT
GCCGTACATTCTGTTTCGACTCAACACACGGCACACTCGCAAGGGTTACG
CCGAGTGGCTGGAGCTCGGAGCTCATCTGCTGCTCAATGTGGCCACGTTT
TACGTGTACTTTACAAAGGAGTTCTACTGGAAAAACTACCGCACTCCTCA
AAGGATCATATGGTAGAAGCTTTCTAGACCAT
BS33328.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:14:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Alg10-RA | 1350 | CG32076-PA | 1..1350 | 17..1366 | 6750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Alg10-RA | 1529 | CG32076-RA | 105..1455 | 16..1366 | 6755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11165819..11166546 | 639..1366 | 3640 | 100 | Plus |
| 3L | 28110227 | 3L | 11165285..11165763 | 169..647 | 2365 | 99.6 | Plus |
| 3L | 28110227 | 3L | 11165075..11165228 | 16..169 | 770 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:14:08 has no hits.
BS33328.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-18 11:09:21 Download gff for
BS33328.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alg10-RA | 106..1455 | 17..1366 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:20 Download gff for
BS33328.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Alg10-RA | 106..1455 | 17..1366 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:20 Download gff for
BS33328.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11165076..11165228 | 17..169 | 100 | -> | Plus |
| 3L | 11165286..11165756 | 170..640 | 100 | -> | Plus |
| 3L | 11165821..11166546 | 641..1366 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-18 11:09:21 Download gff for
BS33328.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11158176..11158328 | 17..169 | 100 | -> | Plus |
| arm_3L | 11158386..11158856 | 170..640 | 100 | -> | Plus |
| arm_3L | 11158921..11159646 | 641..1366 | 100 | | Plus |
BS33328.pep Sequence
Translation from 16 to 1365
> BS33328.pep
MNGSWKLILPVGFVLYSLPLFLRVNGTSDYVIDEEFHIPQGLAFCRKEFD
VWDPKITTFPGLYLIALLLNPLSLCTVTGLRMLSLAGAGINILLLYKIRR
RILAGSGGNSYAAHEAITMSVLPPLYFFSHLYYTDTLSLTMVLLFYNYWQ
QEAHLPAAVFGAASVLMRQTNIVWVCMATGMTVLDTLVNQCARTGRVPKE
NVRLMGKELWLQLVSSPQLLCNCILSILAKCCFYASIILPFVGFLFINGS
IVVGDKSAHEASLHVPQLFYFAIFAAGFGISNTIRQFRPAAELIRRNRVL
SLLALLLILVVVHLNTEVHPYLLADNRHYTFYIWSRLYGRFWWFRYAMAP
AYLLSICVLFCGLRHMPESFKLMFPLSLFLVLCFQRLLELRYFLVPYILF
RLNTRHTRKGYAEWLELGAHLLLNVATFYVYFTKEFYWKNYRTPQRIIW*
BS33328.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Alg10-PA | 449 | CG32076-PA | 1..449 | 1..449 | 2373 | 100 | Plus |
