BS33345.complete Sequence
728 bp assembled on 2014-01-24
GenBank Submission: KX803317
> BS33345.complete
GAAGTTATCAGTCGACATGGGACGTCGCCGTGCCAAGATGCCTAATTTCA
CCATTGGCGACTTTGTGTTCGCCAAGTTGCGCCGCTATCGCCCCTGGCCA
GGCCGCATCCTGAACCGCATCGGTGCCACGGCCTACAGTGTTTACTTCTA
TGGAAGCTGCAACTACGCCAAAGTGGCTCGCAAAGAGGTCGTCGACTACG
AGAAGAATCTGCATCGACTTGGAGTGGTCCAGCAAAAGGGACACGTCTGC
AATCCAAGTTTCCGGGCCTCCATGCTACAGGCACGCGAGGCATTCGACAA
TCCGGATAAAGATTACGGCTACTACCAGCAGTTGGCTGTGAACAACGGCG
ATTGCATTAACGCCGAGGACCTGGGACTGGAGTACCTGGTAACCGAAGAT
CTTGGCAACCTACTGGACGAACAGGCTGCCACGGAACAGGTGGTGGCGGA
GAAGGATGTCAACGAACAGGTAGCGGTGGAGCAGAATGTGGAGCTAAATT
CACTGGGGCAGATCTTTAGCAACCAGGAGCATGAGAAGGATTCAGAGGAT
TCTGCCTCGAATTGTCAGCTAGAGGAGAAGGATCAATCAAATTCGGAGGT
GGTGAAGGAGCAGGTCTCCGAACGGCATTACTCGATGGCTCAGATAGTTT
CTCTGAAATCGAAGAAACTGATGGATACTCCAATTAACATGACATGCCAA
CGGCGACGCTAGAAGCTTTCTAGACCAT
BS33345.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9926-RB | 696 | CG9926-PB | 1..696 | 17..712 | 3360 | 98.9 | Plus |
| CG9926-RA | 696 | CG9926-PA | 1..696 | 17..712 | 3360 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:55:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9926-RB | 1685 | CG9926-RB | 61..756 | 17..712 | 3360 | 98.9 | Plus |
| CG9926-RA | 915 | CG9926-RA | 61..756 | 17..712 | 3360 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:55:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 13950383..13951078 | 712..17 | 3360 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:55:00 has no hits.
BS33345.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:22 Download gff for
BS33345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9926-RA | 61..756 | 17..712 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:36 Download gff for
BS33345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9926-RA | 61..756 | 17..712 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:36 Download gff for
BS33345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 13950383..13951078 | 17..712 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:22 Download gff for
BS33345.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9776105..9776800 | 17..712 | 98 | | Minus |
BS33345.pep Sequence
Translation from 16 to 711
> BS33345.pep
MGRRRAKMPNFTIGDFVFAKLRRYRPWPGRILNRIGATAYSVYFYGSCNY
AKVARKEVVDYEKNLHRLGVVQQKGHVCNPSFRASMLQAREAFDNPDKDY
GYYQQLAVNNGDCINAEDLGLEYLVTEDLGNLLDEQAATEQVVAEKDVNE
QVAVEQNVELNSLGQIFSNQEHEKDSEDSASNCQLEEKDQSNSEVVKEQV
SERHYSMAQIVSLKSKKLMDTPINMTCQRRR*
BS33345.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9926-PB | 231 | CG9926-PB | 1..231 | 1..231 | 1201 | 100 | Plus |
| CG9926-PA | 231 | CG9926-PA | 1..231 | 1..231 | 1201 | 100 | Plus |
