BS33349.complete Sequence
1199 bp assembled on 2014-01-24
GenBank Submission: KX800378
> BS33349.complete
GAAGTTATCAGTCGACATGCTGTTACATTTAAAACTCCGGCTTGAACTTC
AATTACTAGGCCGCTGTGCGCAGCTAGTAATCAATCGCCATGCCAGCAAA
GGAAATGTGGACAAGGAGGTGATGGAGCAAATGGAGAAGGGCTACAAGAA
GTTGGCCGAGTCGAAATCCAAGTCCCTGCTGAAGAAGCATCTCACCAAGG
AGATCTTCGAGAAGCTAAAGACGAAGACTACACCCTCGTTCAACTCCACA
CTGCTGCACTGCATCAGTTCGGGAATGTGCAATCATGACTCCGGCGTTGG
GCTCTACGCCCCCGATCCGGAGGCATATAAGGTGTTTGCCGATCTCTTTG
ATCCCGTCATCGAGGAATACCATAAGTGCTTCAAGAAGACGGACAAACAG
CCGGCGACTGCTTTCGGCAAAGGCGCGGATTTTGAAAACCTAGATCCCGA
TGGCCATTTCATCGTATCCACGCGTGTCCGTTGCGGAAGAGCCGTCAAAG
GATACCCCTTCAATCCCTGCTTAACGGAGGCTGACTACATGGAGCTGGAG
AGTAAGATTTGTGGGGCAGTGACTAGCCTCACCGGAGAGTACAAGGGTAA
ATACATGCCATTGACTGGAATGGATAAATGCATACAGGAGCAGCTCATAG
AGGATCACTATCTGTTCAAGGAGGGCGATCGATTTCTGGCTTCCGCTGGA
GCCTCTCGATATTGGCCAACGGGAAGGGGCATCTTTCTGAATAGCGCCAA
GAACTTTCTGGTCTGGTGCAACGAGGAGGACCACATACGCATCATCTCGA
TGGAGAAGGGTGGCGACCTGGGCAAGGTCTACGATCGCATGGTTGGCGGC
GTGGAGGCTCTCGGCAAGCAGCTGCAATTCAACAGGGATGAACGACTTGG
CTTTTTAACCTTCTGTCCCACCAATCTGGGCACTTCTATTCGCGCCTCGG
TGCACATCAAGCTGCCCAATCTAATGTGTGATCCCGACGAGATGAAAAAG
CTGGCCGACAAGTATCGTCTACAAATCAGAGGAACCTCGGGCGAGCACTC
AGAGGCCAAGGGCGGAGTGCACGATATATCCAACCAACGCAGGATGGGAC
TAACCGAATACGAAATCATCAAAGAGATGCACGATGGAATCAAGGGTCTC
ATAGAAGCCGAGTGTAAGGCAAAGTCAGCTTAGAAGCTTTCTAGACCAT
BS33349.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:55:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5144-RA | 1167 | CG5144-PA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
| Argk-RG | 1071 | CG32031-PG | 64..866 | 167..969 | 415 | 70.1 | Plus |
| Argk-RH | 1071 | CG32031-PH | 64..866 | 167..969 | 415 | 70.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:55:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5144-RA | 1286 | CG5144-RA | 58..1224 | 17..1183 | 5835 | 100 | Plus |
| Argk-RG | 2110 | CG32031-RG | 707..1509 | 167..969 | 415 | 70.1 | Plus |
| Argk-RH | 1576 | CG32031-RH | 74..876 | 167..969 | 415 | 70.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:55:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9047496..9048662 | 17..1183 | 5835 | 100 | Plus |
| 3L | 28110227 | 3L | 9049481..9050283 | 969..167 | 415 | 70.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:55:10 has no hits.
BS33349.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:26 Download gff for
BS33349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5144-RA | 58..1224 | 17..1183 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:42 Download gff for
BS33349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5144-RA | 58..1224 | 17..1183 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:42 Download gff for
BS33349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9047496..9048662 | 17..1183 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:26 Download gff for
BS33349.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9040596..9041762 | 17..1183 | 100 | | Plus |
BS33349.pep Sequence
Translation from 16 to 1182
> BS33349.pep
MLLHLKLRLELQLLGRCAQLVINRHASKGNVDKEVMEQMEKGYKKLAESK
SKSLLKKHLTKEIFEKLKTKTTPSFNSTLLHCISSGMCNHDSGVGLYAPD
PEAYKVFADLFDPVIEEYHKCFKKTDKQPATAFGKGADFENLDPDGHFIV
STRVRCGRAVKGYPFNPCLTEADYMELESKICGAVTSLTGEYKGKYMPLT
GMDKCIQEQLIEDHYLFKEGDRFLASAGASRYWPTGRGIFLNSAKNFLVW
CNEEDHIRIISMEKGGDLGKVYDRMVGGVEALGKQLQFNRDERLGFLTFC
PTNLGTSIRASVHIKLPNLMCDPDEMKKLADKYRLQIRGTSGEHSEAKGG
VHDISNQRRMGLTEYEIIKEMHDGIKGLIEAECKAKSA*
BS33349.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5144-PA | 388 | CG5144-PA | 1..388 | 1..388 | 2055 | 100 | Plus |
| Argk-PG | 356 | CG32031-PG | 2..353 | 31..382 | 1259 | 64.2 | Plus |
| Argk-PH | 356 | CG32031-PH | 2..353 | 31..382 | 1259 | 64.2 | Plus |
| Argk-PD | 356 | CG32031-PD | 2..353 | 31..382 | 1259 | 64.2 | Plus |
| Argk-PE | 375 | CG32031-PE | 21..372 | 31..382 | 1259 | 64.2 | Plus |
