BS33354.complete Sequence
1076 bp assembled on 2014-07-18
GenBank Submission: KX804726
> BS33354.complete
GAAGTTATCAGTCGACATGCAGCAAGGCGAACTCCGGCGCAAAAAAACAA
CAACAATTGCTGACATGTGCAACGTAGCATGCAAAACGGGGATTTTCCGG
AACTACTTGCGGGCAAGTGGCCAAAGGACCTGGATGTCGGTGCTCCTGGT
GCTCGTCCTTATGGGTACCTTCACAGCCGCGGAACCCCTGAAAGTTATAT
ACGCGGTCAACGCTGGCGGAGATGAGCACACCGATCTTAACGGGGTCCAA
TACGATGCGGATCCTCTCAAAGGAGTTGGAATAGCTTCGGACTACGGCAA
ACACCTGCTGATGATCGGCCGGGTACAGGAACATGACGAGGTGCTCTACA
GGACCGAGCGGTATCACACCACTACATTTGGGTACGATTTACCAAGCGAT
GGCGATGGAGATTACGCCTTGATAATGAAGTTCTGTGAGGTATACTTTGA
TGCGCCGCAGAAGAAGGTTTTCGATGTGCTCCTAAACCGCAAGCACACGG
TTGTCCGCCAGCTGGACATCTACAACGAGGTGGGCAGGGGCTCGGCACAC
GACGAGATTGTGTACTTTAAGATCAACAACGGACGATTAAACTATGAAGG
CGAGGTGTCCGATGTGCGAAATGGCCGCCTCCGGCTGGACTTTATAAAGG
GGGCACTGGATAATCCCAAGATCAATGCATTCGCCCTGCTCAAGGGAGAT
ATCTCCCAGGTGCCACGAATGCATGGTACCGAGGCGACTGAGAGGATTAA
ACCGGAGGGTAAGCTGAACGCGGAACAGAAGAAAGCTCAGCAGGTAGAGA
GGGTGGTGCGCAACCAGCGGGACGACATTGATGAGGATGACGAGGACCTG
GACGACGAAGAGTTTGAAGAGGAGCTTTCCGAGCAGAATGTCGACAAGCT
GGGCAGCGATCAGCCGTCGCTGCAATCGGACACAAAGCGGTCTTACAGTG
GCCCCCGCCAACCGAATCCATACTCCATGGACGACTCATCGATCTTGCTA
CCAGTTTTCATCGCCATCGGGGCCTTTATACCACTGCTGTTCTGCCTCTG
CAAGCTGTGAAAGCTTTCTAGACCAT
BS33354.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:14:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9257-RA | 1044 | CG9257-PA | 1..1044 | 17..1060 | 5220 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9257-RA | 1579 | CG9257-RA | 141..1184 | 17..1060 | 5220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21102883..21103926 | 17..1060 | 5220 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 15:14:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 820..947 | 772..900 | 110 | 56.9 | Plus |
Rt1c | 5443 | Rt1c RT1C 5443bp | 1401..1438 | 637..600 | 109 | 76.3 | Minus |
BS33354.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-18 11:09:23 Download gff for
BS33354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9257-RA | 141..1183 | 17..1059 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:22 Download gff for
BS33354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9257-RA | 141..1183 | 17..1059 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:22 Download gff for
BS33354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21102883..21103925 | 17..1059 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-18 11:09:23 Download gff for
BS33354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21102883..21103925 | 17..1059 | 100 | | Plus |
BS33354.pep Sequence
Translation from 16 to 1059
> BS33354.pep
MQQGELRRKKTTTIADMCNVACKTGIFRNYLRASGQRTWMSVLLVLVLMG
TFTAAEPLKVIYAVNAGGDEHTDLNGVQYDADPLKGVGIASDYGKHLLMI
GRVQEHDEVLYRTERYHTTTFGYDLPSDGDGDYALIMKFCEVYFDAPQKK
VFDVLLNRKHTVVRQLDIYNEVGRGSAHDEIVYFKINNGRLNYEGEVSDV
RNGRLRLDFIKGALDNPKINAFALLKGDISQVPRMHGTEATERIKPEGKL
NAEQKKAQQVERVVRNQRDDIDEDDEDLDDEEFEEELSEQNVDKLGSDQP
SLQSDTKRSYSGPRQPNPYSMDDSSILLPVFIAIGAFIPLLFCLCKL*
BS33354.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9257-PA | 347 | CG9257-PA | 1..347 | 1..347 | 1810 | 100 | Plus |