BS33355.complete Sequence
1166 bp assembled on 2014-07-18
GenBank Submission: KX802057
> BS33355.complete
GAAGTTATCAGTCGACATGGCCTGGAAGACTTTCACGCTTCTACCCCTGC
TATTGGCAGCAGGTCTAGCTAATCCCTTGAGCTCCACAACGGAGCCATCT
ACCCCACCAGCTGCCAATCCTGACGTGCCGCAGATCATAAAGGAGGAGCA
CTTCCCGGCCATGGCCCCGGCCCAGGCTCTGGAGTCCAGCGGATCCAGTG
GGCAACCCATAATGCTGCAACCTCCTCTCGAATCGCCCAGCGCAGATGAG
GACGCACTGCGTCGCCGCACAATCACGTATGATCAGCGCCAGGAGGGGCA
GTACAACATTCGTGCTGATCTGGAGAACTTCATGATCCTCCTGATTCCAC
CTGGACCGCAGGAGGGCATCAGCCTGCTGGAGCTACTGGGTCGCGGAAAC
ACCAAGGGCAGTGGATCGCTCAAGCGCAAACATCCCGCGAGGAGCAACTC
ACTGAAGTCCTTCTACCAGAAAAGTCAGCTGCAGAAGTTGCAGCAGCAAC
AGAATCAGCGCCAATCCTCGCCAGCGGCGCATCTGCCGGAGTTCATTGAG
GGTCGGTCGCCCTATCACGTGGACATCTCAGCCAGCGATCCGGAGCAGGC
TCAACGCCTGCAGCGCCAGCAGGTGGACGTGCTGCCTCCGCAACTGATAC
CCATGCCGCAGCTAATTAAGCCCTTCCACTTGGAGGCGGAACCGGAGTTG
ATTCAAGCTCTGCCCCCCGTCTCCGCCAGCAGCAGTGCCGGTTCTAATCT
CCTCGAGAGCTTCAATCATCCCGGATCGCAGTACTTCCGCAGCTCCCGCT
CCTTGAGAGGCGATAGCTATCTGGATACCAATCGCCTGACCGGCGGCGAT
TATGCCAGTCCGCGCTCCATTAGTGCCCCCATTTACCGCAGCGATCTTGG
CAGAGGAGCCAATGGCCTTTACCCCCCCATCGACGCACCCACCTACTTCT
CGGACCAATCGCGCTCCTGGCAACTGGACGAGGAACCCACTCGGGCACAA
GCGGTGGAACCGGAGATCGTTAGCTTCGATCTGTTGGCCGACGACGACCT
GGCCGAGTCCCGAACCCTCCTCCGGGACGGACTGGCGCGCTGCGCTCGCG
GAGAACGTCGTGATAGCTACGGCGAATGTCGCCAGATCGAGGGCTATTAA
AAGCTTTCTAGACCAT
BS33355.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:14:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13082-RA | 1134 | CG13082-PA | 1..1134 | 17..1150 | 5670 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:14:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13082-RA | 1316 | CG13082-RA | 72..1205 | 17..1150 | 5670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:14:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19538496..19539629 | 17..1150 | 5670 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 15:14:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2332..2381 | 465..514 | 115 | 70 | Plus |
| gypsy11 | 4428 | gypsy11 GYPSY11 4428bp | 978..1037 | 476..532 | 113 | 68.3 | Plus |
BS33355.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-07-18 11:09:24 Download gff for
BS33355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13082-RA | 72..1203 | 17..1148 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:34:23 Download gff for
BS33355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13082-RA | 72..1203 | 17..1148 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:34:23 Download gff for
BS33355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19538496..19539627 | 17..1148 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-07-18 11:09:24 Download gff for
BS33355.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19538496..19539627 | 17..1148 | 100 | | Plus |
BS33355.pep Sequence
Translation from 16 to 1149
> BS33355.pep
MAWKTFTLLPLLLAAGLANPLSSTTEPSTPPAANPDVPQIIKEEHFPAMA
PAQALESSGSSGQPIMLQPPLESPSADEDALRRRTITYDQRQEGQYNIRA
DLENFMILLIPPGPQEGISLLELLGRGNTKGSGSLKRKHPARSNSLKSFY
QKSQLQKLQQQQNQRQSSPAAHLPEFIEGRSPYHVDISASDPEQAQRLQR
QQVDVLPPQLIPMPQLIKPFHLEAEPELIQALPPVSASSSAGSNLLESFN
HPGSQYFRSSRSLRGDSYLDTNRLTGGDYASPRSISAPIYRSDLGRGANG
LYPPIDAPTYFSDQSRSWQLDEEPTRAQAVEPEIVSFDLLADDDLAESRT
LLRDGLARCARGERRDSYGECRQIEGY*
BS33355.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:10:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13082-PA | 377 | CG13082-PA | 1..377 | 1..377 | 1943 | 100 | Plus |
