BS33357.complete Sequence
2087 bp assembled on 2014-03-03
GenBank Submission: KX800234
> BS33357.complete
GAAGTTATCAGTCGACATGCTGAAGCTAAGCCTAGTGGCCTGGCTCATAT
TTTCGCTGGCTTGGCGCACCACGCCCACCGCCTGTCGCCAGACCAACGCA
CCCCAGAGCGTTCAGGAAATGCTGGCCGAGCAGCTGCAAAGCTACATGGA
TACGAAGGCGCGTCCCTGCGAGAACTTCTACCAGTACGCCTGCGGCAACT
GGCAGATCCAGCAGCAGGAGCAGCACTCCCTGCGCGACAGAGATTGGACG
AGGGATCGGCAGCGGTACCAGGGTCAGATGCTGCCCACCGACACCCTGGG
ACTGATAGACCACTCCGTGAATCGGAAGCTGGAGCTGCTGCTGCGGCGAA
GGAATGAGAGCTCCTTCGAGTCGGACTCCTCGATTCTGGAGCAGATGCGA
CTCTACTACCGTTCGTGCAAACGCCTTAAGCCGTACAACCTCAAGAAGTA
CCTGCAGCTCCTGCCCCCCAGCAACTCCACGCAGTGGCCATCGGTGGGTC
GGGGCTGGCGTCCGGAGCGGTTCGACTGGATAACGACCTTGGGGCGACTG
CGTCTGCACGGACTGAACGGGGTGCTGCTGCGGGAGGAGGTACTGCCGCG
ATGGGATGACTCTCGCAACTACAGTATCTATGTGAACAAGCCGAGTCGCC
AGGAGACGCAGCCCATGGGAGAAGGTGCCATGATCGAGCTGCTTCTGGAC
ATTGGGCAGACAAAGCGAACGGCCAATGCCTTGGCTCGCCAGGTGGACGA
CTTCGAACGAAAATTGCACCGCCTGCAGGAGCTGGAGGACGACGAAGGAC
CACGAGAAATGCAGCTTGGTTACTTGGACTCGTACCTGCCACAGCTACGA
TGGTTATCCTTCATGCGCCAGGTACGCATTGACTCCGAGCTGGATCTGCG
CTCCACATTAATCATCGAGAATATTCCGTACCTCAGGGCCCTGAGCGATC
TGATGGAATCGGAGAGCCCGGACACCGTTTGCAGCTACATCATGCTCAAG
TGGTTGGCCTTCCTCAAGCAACAGGGACCCGCGGACATCTCACGAGGTGA
GTGCGTGGCCGCCCTCAGAAGAGCCATGCCTCTGGCCAGTAGCTGGCTGG
TGGGTCAGCAGTTCTCCGATCCGGAATCCGAATCCTACGTAAGCTCACTG
TTCCAGCGTTTGAAGGTGCGATTTGGCCAAATCTTGGCTGAAAACCGAAT
GAGACTATCGCCACCACTGGTGCACATCCTGCAGCAGAAACTGCGCGCAG
TTCGACTGCAGATGGGCTTCTTTCAGACGGAGGAAATTGAGGATGTGGAG
CAGTACCACGTCCGCATCGACCTGAGCGGCCACTCCTTCTATGGCAACCA
GCTGGTCTTGCTGCGACAACGCGTTGAGGCGAACCACGATCTGCTTTACA
TAAATGTGACAAACTTCGCAAATTCCACGGGGAGCAACTTGAGTTACCTG
TCGGAAAGCTGGGAGGCCAGCAACTCGTCGCCCCTGTATGTGAGACCACG
CAATCTGGTCCTGGTGCCGCACGGTCTGCTCCAGCTGCCCATCTGGCATC
GAAACATTAGCGCCCTGCAGCAGCACGCCGTGATGGGATTTGTCCTGGCC
CACGAGCTGGCACACGGATTCGATATGTTGGGAATGGACTACGACGCCAT
GGGAAACATCATGGGGCCCGTGGAGGAGATCGGCGCTAGCCGTCAGTTCC
GACAAGGACTCCAGTGTCTTCAGCAACAGATGGCCACCGGTTCCAAGTGG
ATCGACGAAAAGCTGGCCGACTTTGTGGCTCTGCGTCTAGCGTATGAGAC
CTTTTTCGGGGTGCGGGACAAGCGGGAGCCCAGGGATCCTCTGCTGCCGC
AGTTCAGCCAGCGGCAGCTATTCTTCATCACCTTCGCCCAGTTCTTTTGC
GGCCGGACGCCCGTGCTCAGTCCGCGATCTCAGTCGGAGGCTCATTTGAA
GCACGCCGCGGATGAGTTGCGTGTGATGCAGACGCTGGCCAATTTTGAAG
AGTTCTCTAGGGAGTTCGGGTGCGATAAGAAGGCCAAGATGCAGGCCAGC
CAGCGGTGCCGCATCTGGTAAAAGCTTTCTAGACCAT
BS33357.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:05:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9507-RA | 2055 | CG9507-PA | 1..2055 | 17..2071 | 10260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9507-RA | 2154 | CG9507-RA | 32..2087 | 16..2071 | 10265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:05:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6381297..6383352 | 16..2071 | 10265 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 15:05:21 has no hits.
BS33357.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:26:14 Download gff for
BS33357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9507-RA | 33..2085 | 17..2069 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:31:09 Download gff for
BS33357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9507-RA | 33..2085 | 17..2069 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:31:09 Download gff for
BS33357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6381298..6383350 | 17..2069 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:26:14 Download gff for
BS33357.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6381298..6383350 | 17..2069 | 99 | | Plus |
BS33357.pep Sequence
Translation from 16 to 2070
> BS33357.pep
MLKLSLVAWLIFSLAWRTTPTACRQTNAPQSVQEMLAEQLQSYMDTKARP
CENFYQYACGNWQIQQQEQHSLRDRDWTRDRQRYQGQMLPTDTLGLIDHS
VNRKLELLLRRRNESSFESDSSILEQMRLYYRSCKRLKPYNLKKYLQLLP
PSNSTQWPSVGRGWRPERFDWITTLGRLRLHGLNGVLLREEVLPRWDDSR
NYSIYVNKPSRQETQPMGEGAMIELLLDIGQTKRTANALARQVDDFERKL
HRLQELEDDEGPREMQLGYLDSYLPQLRWLSFMRQVRIDSELDLRSTLII
ENIPYLRALSDLMESESPDTVCSYIMLKWLAFLKQQGPADISRGECVAAL
RRAMPLASSWLVGQQFSDPESESYVSSLFQRLKVRFGQILAENRMRLSPP
LVHILQQKLRAVRLQMGFFQTEEIEDVEQYHVRIDLSGHSFYGNQLVLLR
QRVEANHDLLYINVTNFANSTGSNLSYLSESWEASNSSPLYVRPRNLVLV
PHGLLQLPIWHRNISALQQHAVMGFVLAHELAHGFDMLGMDYDAMGNIMG
PVEEIGASRQFRQGLQCLQQQMATGSKWIDEKLADFVALRLAYETFFGVR
DKREPRDPLLPQFSQRQLFFITFAQFFCGRTPVLSPRSQSEAHLKHAADE
LRVMQTLANFEEFSREFGCDKKAKMQASQRCRIW*
BS33357.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:03:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9507-PA | 684 | CG9507-PA | 1..684 | 1..684 | 3579 | 100 | Plus |
| CG42370-PA | 655 | CG9508-PA | 2..655 | 9..684 | 633 | 27.3 | Plus |
| CG4580-PA | 619 | CG4580-PA | 20..619 | 36..683 | 433 | 24.9 | Plus |
| CG8550-PA | 633 | CG8550-PA | 29..619 | 37..684 | 421 | 23.9 | Plus |
| frma-PG | 611 | CG3239-PG | 14..611 | 35..684 | 382 | 23.7 | Plus |
