BS33361.complete Sequence
425 bp assembled on 2014-01-24
GenBank Submission: KX801778
> BS33361.complete
GAAGTTATCAGTCGACATGCAGATAACAATCAAGGTGCTGAAGGGCAAGG
ACTGCACCATCGAGGTGGCGCCGACATCGACGATTCTGGAGGTGAAACAC
CAGATCGAGGCGGAACTGCAGATATCGGCTACAAATCAAAAGCTACTGCT
GTTGGGGCGACCGCTTAACAATGAACAGACAATTGCGTCATATCCCAACA
TCAAGGAGGGCACCAAACTCAATCTGGTGGTGATAAAGCCCTGTTTAAGG
GACAGCATCCTGCGGGGATTCCGCAAGCACTATTCGGAGCCCCTAGCTGA
GCGTATGACCAATGAGTTTATGGCCGACTTCGAGCGGAAAATCAACGAGC
AGAGCCTGGACGACCTGGAGAGACTGGCGGACAGCATAGTCAACAGAGCG
GCCACATAGAAGCTTTCTAGACCAT
BS33361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:55:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7215-RB | 393 | CG7215-PB | 1..393 | 17..409 | 1965 | 100 | Plus |
| CG7215-RA | 393 | CG7215-PA | 1..393 | 17..409 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:55:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7215-RB | 635 | CG7215-RB | 96..488 | 17..409 | 1965 | 100 | Plus |
| CG7215-RA | 1449 | CG7215-RA | 96..488 | 17..409 | 1965 | 100 | Plus |
| Prx5-RA | 1449 | CG7217-RA | 96..488 | 17..409 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:55:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18166727..18167073 | 409..63 | 1735 | 100 | Minus |
| 3R | 32079331 | 3R | 18167129..18167178 | 66..17 | 250 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:55:22 has no hits.
BS33361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:30 Download gff for
BS33361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7215-RA | 96..488 | 17..409 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:26:46 Download gff for
BS33361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Prx5-RA | 96..488 | 17..409 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:26:46 Download gff for
BS33361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18166727..18167071 | 65..409 | 100 | <- | Minus |
| 3R | 18167131..18167178 | 17..64 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:30 Download gff for
BS33361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13992449..13992793 | 65..409 | 100 | <- | Minus |
| arm_3R | 13992853..13992900 | 17..64 | 100 | | Minus |
BS33361.pep Sequence
Translation from 16 to 408
> BS33361.pep
MQITIKVLKGKDCTIEVAPTSTILEVKHQIEAELQISATNQKLLLLGRPL
NNEQTIASYPNIKEGTKLNLVVIKPCLRDSILRGFRKHYSEPLAERMTNE
FMADFERKINEQSLDDLERLADSIVNRAAT*
BS33361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:56:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7215-PB | 130 | CG7215-PB | 1..130 | 1..130 | 649 | 100 | Plus |
| CG7215-PA | 130 | CG7215-PA | 1..130 | 1..130 | 649 | 100 | Plus |
