BS33391.complete Sequence
1409 bp assembled on 2014-01-24
GenBank Submission: KX805083
> BS33391.complete
GAAGTTATCAGTCGACATGTACGTGTCCAAATTTGAGGCGAGCATGGCTA
CGAATTTTGTTATTTATCTGGCGCTTGGGGCACTCCTCTGCCTGGCCACT
GCCAACGGGGAAATAGTGAACACAAATGTGGAGCGAACGCTGGACCTAAC
ATCGCAGCTGGTAAAGACGACCACCAAGATCTCGGCGGAAGATTCGGCCG
GCAAGCCGATTGTGGAATACGTGTTTTTCACATCGGAGCCCAGTTTGGCG
TACATTGACGTAAAAGATGCTAGCGACAAGAGTGTGCCATTCAAGCGGAA
TGAGCCCGTGAAGGGGGAGCAGAGCTTCACGTTCACCTTCCCCAGGGCCG
CCGCCAAGCAGACGTTCATCGTCGAGACCGTGGCCTCTAAGGGCATCCGC
CCACATCCGGAGGAGATACGGCAGAACGACAAGCAGTTCGTGAAATATAC
GGGCAATCTGCACCTCTATTCCAAGTACAGGACCAACAGCCAGAAGACCA
ATGTCAAGCTCAGCTCCTCGAACATCTTGTCGCACACCCAGGTCAAACCC
TTTTCGGTGTCCTCCAACAAGATCACCCTGGGACCCTACGAAAACGTAGA
GGCCTTCAGCCAGGAGCCACTAGTCATCCACTATGAGAACTCCGCACCAT
TCGTCACCGTCAATACGCTGGAACGCACGCTGGAGATATCGCATTGGGGC
AACATTGCCGTCCAGGAGTCTATTCAGATGACGCACACCGGGGCCAAGCT
GAAGGGCTCGTTCTCGCGCTACGATTTCCAGAAGGAAGGACGCTCCGGAC
TGGCGGCCCTCAAGTCGTACAAGACCTACCTGCCAGCATCCGCATCTGGT
GTCTATTACCGCGACACCAATGGCAACATTTCCACCTCCAACATGAACGC
CGTGCGCGACTTCATCGAGCTGGAGCTGCGTCCGCGCTTCCCGCTCTTCG
GCGGCTGGAAAACGCAATACACTCTGGGCTACAATGTGCCCTCGTACGAG
TACATGTTCAACGATGGCAACAAGTACCAGCTGAAGATGCACCTCATCGA
TCACATCTACGACAATATGGCCATCGATGAGGCCACCATCAAGATTATTC
TGCCTGAGGGATCCAGTGACATTAGGCTGTCCACGCCCTACTCCATCAGC
CGATTGCCCAATGAGCTGGTGCACACCTATCTGGATACCATTGGTCGCCC
GGTGGTCTCGTTCTCCAAATCCAATTTGGTCGAAAGCCACATTTCGGACT
TTACGCTCCACTACAGCTTCTCGAAGACTTCTATGCTGCAGGAACCCCTG
CTGGTCAGCGGCTTTATTTATATCATCTTCTTGTTCACCATCGTCTTCTT
GCGTTTGGACTTTTCGATCACATCCCATGCGCATAAGGAATAAAAGCTTT
CTAGACCAT
BS33391.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33303-RB | 1377 | CG33303-PB | 1..1377 | 17..1393 | 6885 | 100 | Plus |
| CG33303-RA | 1377 | CG33303-PA | 1..1377 | 17..1393 | 6885 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33303-RB | 2333 | CG33303-RB | 25..1401 | 17..1393 | 6885 | 100 | Plus |
| CG33303-RA | 1516 | CG33303-RA | 25..1401 | 17..1393 | 6885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:56:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10374301..10375092 | 1393..602 | 3960 | 100 | Minus |
| 2L | 23513712 | 2L | 10375148..10375733 | 602..17 | 2930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:56:13 has no hits.
BS33391.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:53 Download gff for
BS33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33303-RA | 25..1399 | 17..1391 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:15 Download gff for
BS33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33303-RA | 25..1399 | 17..1391 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:15 Download gff for
BS33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10374303..10375091 | 603..1391 | 100 | <- | Minus |
| 2L | 10375148..10375733 | 17..602 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:53 Download gff for
BS33391.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10374303..10375091 | 603..1391 | 100 | <- | Minus |
| arm_2L | 10375148..10375733 | 17..602 | 100 | | Minus |
BS33391.pep Sequence
Translation from 16 to 1392
> BS33391.pep
MYVSKFEASMATNFVIYLALGALLCLATANGEIVNTNVERTLDLTSQLVK
TTTKISAEDSAGKPIVEYVFFTSEPSLAYIDVKDASDKSVPFKRNEPVKG
EQSFTFTFPRAAAKQTFIVETVASKGIRPHPEEIRQNDKQFVKYTGNLHL
YSKYRTNSQKTNVKLSSSNILSHTQVKPFSVSSNKITLGPYENVEAFSQE
PLVIHYENSAPFVTVNTLERTLEISHWGNIAVQESIQMTHTGAKLKGSFS
RYDFQKEGRSGLAALKSYKTYLPASASGVYYRDTNGNISTSNMNAVRDFI
ELELRPRFPLFGGWKTQYTLGYNVPSYEYMFNDGNKYQLKMHLIDHIYDN
MAIDEATIKIILPEGSSDIRLSTPYSISRLPNELVHTYLDTIGRPVVSFS
KSNLVESHISDFTLHYSFSKTSMLQEPLLVSGFIYIIFLFTIVFLRLDFS
ITSHAHKE*
BS33391.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:57:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33303-PB | 458 | CG33303-PB | 1..458 | 1..458 | 2347 | 100 | Plus |
| CG33303-PA | 458 | CG33303-PA | 1..458 | 1..458 | 2347 | 100 | Plus |
