BS33393.complete Sequence
530 bp assembled on 2014-01-24
GenBank Submission: KX805619
> BS33393.complete
GAAGTTATCAGTCGACATGTTAGATGTTAATGATCTGGTTAAGGAGGAGT
TCGCCCTGGAGGATCCAAATGAGGAAGAGCACAATCAAAGAGACGAGGAA
GAGATAAGCTATCAATTGGCTGGCCAGCCAAAAATGTGTTCTACGTGCTT
GGAGGCTTTTCCCATCGACAACTTTTCATCTCACGCATGCTGGGACATCA
ATTGCGATCGATTCAGCTGCAAAATCTTCCCTCGAAAGTTTCGTTACAAG
TCATTGCTTAAAAAGCCACGTCAGACGGCAAAAGGGCGAGAGCATAGCGG
AACTGGATTTAGCGAAACCCACAGACTCCAGGACCAAGCCCAACTTCGAG
TTAAACTACTCACCCACTCCAAGGTGGAAGATATCTCGACGGAGAGCTGG
GATGCTGAAGCTCAACGAAATGCGTGTGCATCAACAACGCCTGTGCCTCT
ATTGCCCCATTGCCTTCTCAAACGAATCGCACCTGGAGAAGCACCTGAGG
GATCACCATGCTGAAAGCTTTCTAGACCAT
BS33393.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:56:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14117-RD | 498 | CG14117-PD | 1..498 | 17..514 | 2490 | 100 | Plus |
| CG14117-RE | 285 | CG14117-PE | 1..285 | 17..297 | 1330 | 98.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:56:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14117-RD | 1049 | CG14117-RD | 289..786 | 17..514 | 2490 | 100 | Plus |
| CG14117-RE | 1053 | CG14117-RE | 289..790 | 17..514 | 2415 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:56:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13008936..13009187 | 263..514 | 1260 | 100 | Plus |
| 3L | 28110227 | 3L | 13008628..13008873 | 17..262 | 1230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:56:16 has no hits.
BS33393.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:49:55 Download gff for
BS33393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14117-RD | 294..785 | 22..513 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:16 Download gff for
BS33393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14117-RD | 294..785 | 22..513 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:16 Download gff for
BS33393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13008633..13008873 | 22..262 | 100 | -> | Plus |
| 3L | 13008936..13009186 | 263..513 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:49:55 Download gff for
BS33393.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13001733..13001973 | 22..262 | 100 | -> | Plus |
| arm_3L | 13002036..13002286 | 263..513 | 100 | | Plus |
BS33393.pep Sequence
Translation from 16 to 513
> BS33393.pep
MLDVNDLVKEEFALEDPNEEEHNQRDEEEISYQLAGQPKMCSTCLEAFPI
DNFSSHACWDINCDRFSCKIFPRKFRYKSLLKKPRQTAKGREHSGTGFSE
THRLQDQAQLRVKLLTHSKVEDISTESWDAEAQRNACASTTPVPLLPHCL
LKRIAPGEAPEGSPC*
BS33393.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:57:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14117-PD | 165 | CG14117-PD | 1..165 | 1..165 | 891 | 100 | Plus |
| CG14117-PE | 94 | CG14117-PE | 1..82 | 1..82 | 450 | 100 | Plus |
