BS33429.complete Sequence
1016 bp assembled on 2014-01-24
GenBank Submission: KX801875
> BS33429.complete
GAAGTTATCAGTCGACATGACGCATCCGCTGGAGGCGCCGCAGCGCAGCC
GCAAATACCCCTTCGTGCATATGCGCATCGCGGACCACAGCGCACTGGAC
ACCATCGAGGGGCGCCACAACTGCCGCCTGTGCAACCGATCGCGCAAGTT
CTTCTGCTACAGCTGCTGTGTGCCGGTTGGCGAGCTGGAGGAGCTGCTGC
CACGTCTGGAGCTGCCGCTCCAAGTGGACATCATTAAGCACAAAAAGGAA
ATCGACGGCAAGAGCTCGGCGGTGCACGCGGCCGTTCTGGCGCCGGCGCA
CGTGAGGATCCACACATTTCCGGACATTCCCGACTATCGCGAGGAGGCGG
GCGTAGTGCTCATATTCCCAAGCGCCACTGCGCTTGCGGTGCCGCAGCTC
TTCGCGCGCAATGTGCAGCTTCAGATCGGCGACAACTACGGGCTGCCCAA
GGGCCACCACATGGGCACCATGCTGCGCAGGCGAATGGACGAGGTGGAGG
TAAAGGAGCTGCAGGAGGAGGTAGATGAGCCGGAGACGGTGCGACGAACC
TGGACGCTAGACAACCTGCCCGTCCGCCGAGCCGTCTTCATAGACAGCAC
ATGGAACCAGAGTCGCGGGATCTACGCGGACGCCAGGGTGCGCGGCCTAC
GAACGGTGGTGCTGCAGAATCGACTGTCGCAATTCTGGCGCCACCAGCGC
GGCAGTCCGCGCTGGTATCTGGCCACCATCGAGGCCATTCACCAGTTCCT
CCTGGAGGTGCACATCAATGCCTGGGGCCTGAACACCGCCTATCGCGGAC
TCGATAACCTGGAGATCACCGCGGGCTTCCATCAGCTGGCAGAGCCGCTG
ACCAAGACAGCTGCCAGTGAGAATGTGGGCAGGGAGGCGCCCTACAATGG
GCAGTACGACAATCTGCTCTTCTTCTTCGCCCACATGTACGATCTCATCC
ACAAGTACTATGACCACAACGACCTCATCGCCTACCGACGACCCATCTAG
AAGCTTTCTAGACCAT
BS33429.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2006-RB | 984 | CG2006-PB | 1..984 | 17..1000 | 4920 | 100 | Plus |
| CG2006-RA | 984 | CG2006-PA | 1..984 | 17..1000 | 4920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:56:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2006-RB | 1139 | CG2006-RB | 78..1061 | 17..1000 | 4920 | 100 | Plus |
| CG2006-RA | 1916 | CG2006-RA | 78..1061 | 17..1000 | 4920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:56:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29489545..29490528 | 17..1000 | 4920 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 14:56:35 has no hits.
BS33429.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:50:04 Download gff for
BS33429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2006-RA | 78..1061 | 17..1000 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:24 Download gff for
BS33429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2006-RA | 78..1061 | 17..1000 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:24 Download gff for
BS33429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29489545..29490528 | 17..1000 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:50:04 Download gff for
BS33429.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25315267..25316250 | 17..1000 | 100 | | Plus |
BS33429.pep Sequence
Translation from 16 to 999
> BS33429.pep
MTHPLEAPQRSRKYPFVHMRIADHSALDTIEGRHNCRLCNRSRKFFCYSC
CVPVGELEELLPRLELPLQVDIIKHKKEIDGKSSAVHAAVLAPAHVRIHT
FPDIPDYREEAGVVLIFPSATALAVPQLFARNVQLQIGDNYGLPKGHHMG
TMLRRRMDEVEVKELQEEVDEPETVRRTWTLDNLPVRRAVFIDSTWNQSR
GIYADARVRGLRTVVLQNRLSQFWRHQRGSPRWYLATIEAIHQFLLEVHI
NAWGLNTAYRGLDNLEITAGFHQLAEPLTKTAASENVGREAPYNGQYDNL
LFFFAHMYDLIHKYYDHNDLIAYRRPI*
BS33429.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2006-PB | 327 | CG2006-PB | 1..327 | 1..327 | 1745 | 100 | Plus |
| CG2006-PA | 327 | CG2006-PA | 1..327 | 1..327 | 1745 | 100 | Plus |
