BS33446.complete Sequence
1409 bp assembled on 2014-01-24
GenBank Submission: KX805654
> BS33446.complete
GAAGTTATCAGTCGACATGAATAAGGCATCCCGAATTTTCTGTCCAGCCT
TGATCACACCCAAAAATGCGGTGGTCAAGCAAACGGAGCAACTGTCGCGC
AGCCAAAAGCTGCTGACAGAACTTGGCTTGGTTAAATCGGGCAGCAATGG
CACCTACCAAATAATGCCCATGGCCCAGCGATCGGTAGACAAGTGCATTG
ACTTGGTCCAAAGCAACATGCAACAGGCTGGTGGGCAGAAGATCACCCTG
CCCATCCTGACGCCCACAGGACTTTGGAAGAAGACGGGGCGACTGGACGG
CGATATATCCGAGTTCTACATGGTGCGGGATCGCAGCGGCAAGCAGTTCC
TCATGAGTCCAACCCACGAGGAGGCAGTGACTGCCATGCTGGCCACCACC
TCACCTATTTCCTATCGGCAGCTGCCCTTGAGACTCTTCCAAATCGGTCC
CAAGTTCAGGGATGAGCTTAAGACTCGATTTGGTTTGATGCGAGCCAAGG
AATTCCTAATGAAGGACATGTATTCCTTTGATGTCAGCGAAGAAACAGCC
ATGGAAACTTACACACTAGTTAATGCTGCATACGATAGGTTGTTCAAACA
GCTGGAGGTTCCTTTCGTTAAGGTGAATGCCGCCACTGGCATAATGGGTG
GCAGTGTATCCCACGAATACCATTATGTATCGCCCGTGGGCGAGGACAAC
CTACTGCAGTGCAGTTCCTGCGGCTTTGCTGGCAACTCTGAGGTTGTAAA
GGCCCCAGCTAGCTGCCCGAGCTGTAACAGCTCGGATTTGAAAGAAGTTC
GAGGAGTTGAGGTGGCCCACACCTTCCTGTTGGGGGACAAGTACTCCAAA
CCCTTGGGCGCCACATTTCTCAACACCACTGGGAAGCCGCAATCGTTGGT
CATGGGATGTTATGGCATTGGCATCACTAGGGTTATTGCTGCCGCTCTGG
AAGTCCTCTCCTCCGACCACGAACTCCGTTGGCCAAAGCTCCTAGCACCC
TACGATGTGTGTTTAATAGGACCCAAGCAAGGAAGCAAGGAACAGCCGGA
AGCGGAAGTGATAGAGAATGAACTTCTTCTGAATGTAGGAGAGATTTGCG
GCCACCAGGAGTTGTTGCACGATGATCGCAAGGAGCTGACTATCGGCAAA
CGTTTGCTGGAAGCCAAGCGTCTCGGACATCCGCTTACCATTGTAGTGGG
AGCCAAGTCAGCCCGTCTGGATTCCCCCAAGCTGGAAGTGCACACCAGCA
AAGGAGAAACATATGAGCTCGATTTCAGTGAAACCCTGAAACTGGTGGCA
GAACATAGCCAGCACAAAAAGAGTCTAGAACGAGGATGTTTTCAGAGTGA
AACTGAAGAAAGTAAAAGTCGATCGGTTGGCCATCAGCTTTAGAAGCTTT
CTAGACCAT
BS33446.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-RA | 1377 | CG12186-PA | 1..1377 | 17..1393 | 6705 | 99.1 | Plus |
| Aats-pro-RB | 372 | CG12186-PB | 1..345 | 17..361 | 1665 | 98.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:56:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-RA | 1509 | CG12186-RA | 101..1479 | 15..1393 | 6715 | 99.1 | Plus |
| Aats-pro-RB | 1517 | CG12186-RB | 101..1487 | 15..1393 | 6600 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:56:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2650191..2650961 | 1393..623 | 3735 | 99 | Minus |
| 3L | 28110227 | 3L | 2651019..2651280 | 623..362 | 1310 | 100 | Minus |
| 3L | 28110227 | 3L | 2651342..2651595 | 361..108 | 1240 | 99.2 | Minus |
| 3L | 28110227 | 3L | 2651656..2651750 | 109..15 | 445 | 97.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:56:40 has no hits.
BS33446.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:50:05 Download gff for
BS33446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-pro-RA | 103..1479 | 17..1393 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:26 Download gff for
BS33446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-pro-RA | 103..1479 | 17..1393 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:26 Download gff for
BS33446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2650191..2650960 | 624..1393 | 98 | <- | Minus |
| 3L | 2651019..2651280 | 362..623 | 100 | <- | Minus |
| 3L | 2651342..2651593 | 110..361 | 99 | <- | Minus |
| 3L | 2651656..2651748 | 17..109 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:50:05 Download gff for
BS33446.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2650191..2650960 | 624..1393 | 98 | <- | Minus |
| arm_3L | 2651019..2651280 | 362..623 | 100 | <- | Minus |
| arm_3L | 2651342..2651593 | 110..361 | 99 | <- | Minus |
| arm_3L | 2651656..2651748 | 17..109 | 97 | | Minus |
BS33446.pep Sequence
Translation from 16 to 1392
> BS33446.pep
MNKASRIFCPALITPKNAVVKQTEQLSRSQKLLTELGLVKSGSNGTYQIM
PMAQRSVDKCIDLVQSNMQQAGGQKITLPILTPTGLWKKTGRLDGDISEF
YMVRDRSGKQFLMSPTHEEAVTAMLATTSPISYRQLPLRLFQIGPKFRDE
LKTRFGLMRAKEFLMKDMYSFDVSEETAMETYTLVNAAYDRLFKQLEVPF
VKVNAATGIMGGSVSHEYHYVSPVGEDNLLQCSSCGFAGNSEVVKAPASC
PSCNSSDLKEVRGVEVAHTFLLGDKYSKPLGATFLNTTGKPQSLVMGCYG
IGITRVIAAALEVLSSDHELRWPKLLAPYDVCLIGPKQGSKEQPEAEVIE
NELLLNVGEICGHQELLHDDRKELTIGKRLLEAKRLGHPLTIVVGAKSAR
LDSPKLEVHTSKGETYELDFSETLKLVAEHSQHKKSLERGCFQSETEESK
SRSVGHQL*
BS33446.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:57:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-pro-PA | 458 | CG12186-PA | 1..458 | 1..458 | 2354 | 100 | Plus |
| Aats-pro-PB | 123 | CG12186-PB | 1..118 | 1..118 | 591 | 98.3 | Plus |
