BS33463.complete Sequence
392 bp assembled on 2014-01-24
GenBank Submission: KX800929
> BS33463.complete
GAAGTTATCAGTCGACATGGCACACACTGGCGGGAACCTATCCGGTAACA
TGCAGCCGCCACCGCCTTCCGGAGGCAGGTTCTCCGTGGACATGCAAAGC
CTGCCCTCGCTATCCAACCTGCCATCACCGCTGCAGATCTTCCAAATGGT
CCGAAACTCCCTGCGGCCCTGGGTAGTCTTCTTCAACATCAACAATTTCA
AAACGGCCATCAGCATGCAGCGGCTAAATAGCCGGGTTATTCGGAATCTC
TCCTATTTTCAGGCCAACTACGTTTTCATCTTTTTTGTACTGATGATATA
CTGCCTTTATAATCTTAAGCATCACGGCTCCCTGCATTCTGCTGGTCATC
CTGGCTTCCGCTTTTGGCTGCCATAAAAGCTTTCTAGACCAT
BS33463.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 14:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1418-RA | 582 | CG1418-PA | 1..347 | 17..376 | 1570 | 96.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 14:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1418-RA | 1128 | CG1418-RA | 352..698 | 17..376 | 1570 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 14:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9964375..9964583 | 306..98 | 1045 | 100 | Minus |
| 2R | 25286936 | 2R | 9964634..9964716 | 99..17 | 415 | 100 | Minus |
| 2R | 25286936 | 2R | 9964265..9964334 | 376..307 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 14:56:56 has no hits.
BS33463.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-01-24 09:50:10 Download gff for
BS33463.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1418-RB | 352..709 | 17..374 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:27:34 Download gff for
BS33463.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1418-RA | 642..696 | 320..374 | 100 | | Plus |
| CG1418-RA | 352..641 | 17..306 | 100 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:27:34 Download gff for
BS33463.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9964267..9964334 | 307..374 | 100 | <- | Minus |
| 2R | 9964375..9964581 | 100..306 | 100 | <- | Minus |
| 2R | 9964634..9964716 | 17..99 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2014-01-24 09:50:10 Download gff for
BS33463.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5851772..5851839 | 307..374 | 100 | <- | Minus |
| arm_2R | 5851880..5852086 | 100..306 | 100 | <- | Minus |
| arm_2R | 5852139..5852221 | 17..99 | 100 | | Minus |
BS33463.pep Sequence
Translation from 16 to 375
> BS33463.pep
MAHTGGNLSGNMQPPPPSGGRFSVDMQSLPSLSNLPSPLQIFQMVRNSLR
PWVVFFNINNFKTAISMQRLNSRVIRNLSYFQANYVFIFFVLMIYCLYNL
KHHGSLHSAGHPGFRFWLP*
BS33463.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 09:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1418-PA | 193 | CG1418-PA | 1..97 | 1..97 | 508 | 100 | Plus |
