Clone BS33488 Report

Search the DGRC for BS33488

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:334
Well:88
Vector:pDNR-Dual
Associated Gene/Transcriptwisp-RA
Protein status:BS33488.pep: full length peptide match
Sequenced Size:4154

Clone Sequence Records

BS33488.complete Sequence

4154 bp assembled on 2014-03-03

GenBank Submission: KX805962

> BS33488.complete
GAAGTTATCAGTCGACATGTTCAGCACCCGAATATCCGGCGATATGAAGA
TCTTTGCCGCAGATGTTGCCGAGAGCAGCGTCACAGCAACATGCAACACG
TCCGTACAGCAGCAGCAGTCGCAGCAACTTGAGTTCCGGACACGAATGTC
CGCCGGATCGCCGAGCTCCAAGTCGGGACAGTGTCATCTGAAGTTCGGGA
AGTACAACAATAAAACGGCCAATCTGCTGCGCCAGGTGAATAGTTGCCAC
AGCAGTAACAGCAGCAGCAACACAAGCAACAACAACAACGAGGCCATCAA
GGGACAACAACAGCAGCCACTGCACTACTGCAACAGCAACAACAGTCACT
CGTGGGCCCGAAAGAAATACTTTGGCAATGGCAACAGCAACAACAGTCTG
CTGCAGCAGCAACAGCAACCATCTTCGTTCTTCCAGCGGCAGCAGCAGCA
ACACCAAATGCAGATGCAACAGGAGAAGCAGGCGACGAACAACAACGATG
CGCTGATGAAGAATCAGAATGTTGTCAACGCACACGTGTCTGATTGCAAG
TCTAGCGATAGCAACAACAACAGCACCAGCAGCAGCAACAACAACAGCAC
CATCAGCAGCAACAACAACAACACTAGCAGCGCCAGCAACAACAACACTG
GCAGCAGCAGCAGTTGCAGCAACAGAACAAAGCCAGCCAAATGGCTCAAT
GAGAACAGTAGCAGCAGTAGCAGCAGCAACAATAATAATATCAGCTGCAG
AAATAACAACACCAGTAGCATTGATACCAAGCGACGCAACTCATCAGCGG
GCGCAACTGCCGCTTACTATCGCAAGTCGGAATCGGAATCCGGAAGCTCG
GAAGGTGCAGCAGAATCGACGGAAACGGAGGCAACTCGAACAGGTGGCTG
CAACAGCAACAGGACTGCAGAATCGTCGAGTGCAGATGGTGGCACTCAAG
CAACCATGGGTAAGAGCCAGGATCAGGAGCAGGATCAGACGGTCAAGCAG
AGGCCGCGACAGCAACCTCTGAGTTTCTGGAAAACTAATTACCCACAGAC
AAGCGCCACTCAGCTTAAAGATAAGGAAACGGTAGCAGCAGTTGTGTCGG
CGGCCGCTGTAGCAGCTGCAGCAGCAGCCGCATCAGCATCGGAGCAACAG
CAGCAACAGCAGTCACTGTCCATCGAGCATAGGCGCAACTCGGGCTACCA
GCAGCATCAGCAGCACAACTACTATCCGTATTACTATTCGCAGCCCAAGC
AGTTGACAATCGCCTCGTTCCTGCAGAAGGAAATGCTTCCGGATAGCACT
GAGAAGTCCAGCAGCAATACGGGCGGCAGCAACATGATTAGAAGCAGCAG
CAACGGCAACAGCAACTTCTCACGGCATCAATATGGCCATCAGTCGACGG
GATCTGGCTACCAGCAGCAGCAGCAGCGGTACCGCAATGCCCAGAATGTC
TATCAGCAGTACCAGCATCAGCAGCAACATCATGCGCAGCAGCATACGCA
TCCGCACTTCCGGCGAAAGCACAGTGACAACGGCAGCGGCATCAACAAGA
AGATGCACTACAGTCCACCGGGAAAGAGTGGGGATCCAGCGGACAGATCC
GCATCTGGACAGCAACAGCACCACCATCCACATCAGCAACAGAAGACCAT
CGAGATCTTGGCCAGTAGCCACTTCAACGCCATGCACCGCCGGATGCAGG
GTGGGAATAATAAGAACGGATACTATCAGCACAGCTATAACCCGATGACG
GGCGAAGTTGGTTCCACGCCTACGCGCTCCGAGCACCAAAATATCTATAA
TCTTACTTATATTCACGTGGACACGGAGGCAACCGGCGAGGCCGCATCAG
CAGCGGGATCAACACCGGTGGTCAAGCCATCGCTGCTCAGCAAGCCGAAC
ATTTCGATAACGCCAGCTTCGAGCACAACACCGACAACTGTGGACAGAGC
ACTGCTACCGGCGGTTCGCTCCGTGTCTGCTCCGGCGTCCGGTTCTGCTC
TGCCGGCGCCAGCGAACCACGTACGAAACATGTTTCCACCGCCACCGCTG
GCTATGCTTGGTGGCCACGGATTGCTGTCGCCGGTGACCACGACAACGCC
CACTAAAATGATTAGCTGCGCCCAGCTGGATGAGGCCATAACTGCCGCGG
CCGCCAGTGGTGACAAGTTGTCCACGAGTCCCAGTTATAATCAGGCGGGG
CACTACATTATGCCGCCCCAGCAGCAGCAGCAGCAGCAACTATCGTCGCA
CCCAATCCCGACTGGAACAAGTTCACATCCACCACCGCCGCCCCCGCCAC
ATATGTTCTTCCACTTTGCCGACGGGTTCTGCAATCCGGGTCAGGGTCAC
CAGGCGCCACCAGCTACCATGTGGCCACACTCTAGCTCTCCCTGCTATCC
GGCTTCGTACGGATCCAGCTGCGGAAGCGGAACTGGAGCCGGAACATCAC
CGCACAACAATGATGGGAATGCCGGTGCACTGCGACCAGCATCGCCAGCA
CTTTCCTCATCCTCACTTGGCAGTGAGTCCCAGTGGAGCGGTACAAGCAA
TCGCAGTCGCTTGGGCCACAATGGACATCCCTCCATTTCGCCAACTCCCA
GCGCACTGGGATCTGCCCAGCTATCACCGCATTTGGCCGAGATGCGTGTG
CAGCATCCACTGCACCAGCAACATCCTCCATCGCATGCCAGTCATCGTCC
GCATGGGCAGATGGGCGGACATGCAATGAGCTCCTATGTGCCGCACCGCC
CACCACCACCCCCACATCCGTCCATCTCGTCGCCGAACCCGACGCCAGTT
GCTACTGGAGCCGGAGGGCCTTGGTACGAGATGATCCTGCCGCCGGATCG
CTACTTGGCCCAAGCGCGAAACATTGAGGTCACCGTGCAGCCAGAGAAGC
TTATCTGCATGTGCAAGTACGACAATCTGTCGGCGGAAATCTGGAAGAGA
TTCCGAGGAGCCCAGCAAACGCACAATAAGTTTAAGCTTAAAATGCGTCT
CTGGCGCTACTTGTACCTATGGATGCATCAACCGATGTTTGAGAGGTATC
GCATCTGCCTAGTTGGATCCACCATCACGGGCTTCGGAACGGACTCCTCC
GACATCGATATGTGTCTGCTGCCCGAGCAGGGGGTACATCCCCACCAGCA
TCAGTACCACCAACACCATCACTTCCATAACGAGAAGCGAACGGAGGCTT
TGATCATTCTTACTTTATTCAACGCGGTGTTGAAGGACACGGAGGTTTTC
CAGGACTTCAATCTGATCGAGGCGAGAGTGCCGATCCTGCGCTTCAAGGA
CATCAGCAATGGCATCGAGGTTGATCTTAACTTTAACAACTGTGTGGGCA
TTAAAAACACCTATCTGCTACAACTTTACGCCCAAATGGATTGGCGAACA
CGACCATTGGTGGTGATCGTGAAGCTCTGGGCGCAGTATCACGACATCAA
CGATGCCAAGCGCATGACCATTTCCAGCTACTCGCTGGTGCTAATGGTTC
TGCACTACCTTCAGCATGCCTGCGTGCCCCACGTTCTGCCCTGCCTGCAC
TCCCTGTACCCGGAGAAGTTTCAGCTGGGGCAGCAGGATTGCCTGGATCT
GGATCTCATCGAACCCATCGAGCCCTACCAGGCGCTAAACACCCAGACGC
TCGGCGAGCACCTTCTGGGTTTCTTCAAGTACTACAGCACCTTTGACTTC
CGGAACTTTGCCATCTCGATTCGAACTGGTGGTGTCCTGCCGGTTTCCAC
ATGTCGAATGGCGAAGAGCCCCAAGAACGATGTCTACCAGTGGAAGGAGC
TAAACATTGAGGAGCCCTTCGATCTCTCCAATACGGCCCGATCCGTCTAC
GATGGGCCAACATTTGAGCGTGTGAAGGCCGTTTTTCTGATCTCGGCACG
TCGCCTCGATCACACCCTCGACCTGGCCACCATCTTCCGCCCCATTCACC
ACGTGCCCGAGCACTTTCCCCAGCTGCAGCAGCACCAGCAGCAGTTCGAG
CAGCAGCTTCACCATCCCATATCCGGTCAGCAGCGAAGTGCTGGAGGAGG
AGGAGATGGTGCTAATCCAGTGCCCAGCACGTTGAACCCAGATGCAGCGT
CGACCTTTGCCGAAACGACTGCAGCGCATGTCGCCTAAAAGCTTTCTAGA
CCAT

BS33488.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 15:06:34
Subject Length Description Subject Range Query Range Score Percent Strand
wisp-RC 4122 CG15737-PC 1..4122 17..4138 20610 100 Plus
wisp-RA 4122 CG15737-PA 1..4122 17..4138 20610 100 Plus
wisp-RB 4119 CG15737-PB 1..4119 17..4138 20530 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:06:36
Subject Length Description Subject Range Query Range Score Percent Strand
wisp-RC 5320 CG15737-RC 750..4871 17..4138 20610 100 Plus
wisp-RA 5127 CG15737-RA 557..4678 17..4138 20610 100 Plus
wisp-RB 5124 CG15737-RB 557..4675 17..4138 20530 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 15:06:23
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 11895877..11897363 1073..2559 7435 100 Plus
X 23542271 X 11894764..11895819 17..1072 5280 100 Plus
X 23542271 X 11897431..11897900 2559..3028 2350 100 Plus
X 23542271 X 11899030..11899471 3697..4138 2210 100 Plus
X 23542271 X 11898656..11898965 3387..3696 1550 100 Plus
X 23542271 X 11897954..11898167 3029..3242 1070 100 Plus
X 23542271 X 11898223..11898367 3242..3386 725 100 Plus
3R 32079331 3R 22215689..22215936 3251..3498 235 73 Plus
Blast to na_te.dros performed 2014-11-28 15:06:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2938 555..1212 583 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2219..2877 153..816 566 59.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..3054 86..837 526 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2329..2988 554..1222 505 57.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2292..2975 290..925 433 57.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2458..3155 74..770 426 58.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2952 380..1016 425 57.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2302..2895 602..1228 422 57.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6412..6940 276..815 420 59.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..6928 560..765 409 71.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2322..2689 434..802 408 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6524..7012 248..735 396 57.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2971 330..984 375 55.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6738..7252 242..788 370 57.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2384..2889 246..763 363 58.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6410..6899 334..810 352 57.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6706..7192 292..780 350 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2372..3000 1076..1693 344 55.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2271..2856 633..1214 302 55.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6718..7006 378..680 291 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2308..2989 704..1364 280 55.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6731..7088 376..724 280 59 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2881 1130..1698 277 56.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2333..2708 1293..1673 272 56.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6764..7011 1309..1562 272 60.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2325..2664 1309..1678 267 58.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6726..7171 1197..1649 260 56.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2330..2996 1076..1725 257 56.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2306..2800 1185..1682 251 54.8 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6628..6952 617..935 249 58.1 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6723..7100 1295..1681 232 57 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2312..3001 881..1565 220 55 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6747..7085 1084..1427 219 55.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2346..2990 849..1480 208 54.2 Plus
roo 9092 roo DM_ROO 9092bp 1051..1178 630..761 208 66.2 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6741..6851 704..813 191 67 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2810..2981 246..421 184 59.9 Plus
roo 9092 roo DM_ROO 9092bp 1059..1177 653..781 173 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6941 718..954 171 57.9 Plus
roo 9092 roo DM_ROO 9092bp 1023..1148 672..807 171 63.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6797..7114 1309..1627 169 55.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1376..1587 559..769 164 58.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2305..2455 1532..1682 160 58.8 Plus
roo 9092 roo DM_ROO 9092bp 1063..1190 375..509 155 60 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2400..2533 1309..1446 149 60.7 Plus
BS 5142 BS BS 5142bp 2035..2140 381..488 147 62 Plus
Dvir\Het-A 6610 Dvir\Het-A HETAVIR 6610bp 3254..3501 400..653 137 53.7 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1524..1633 1309..1420 132 60.2 Plus
gypsy11 4428 gypsy11 GYPSY11 4428bp 976..1006 704..734 128 90.3 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2328..2454 1610..1735 127 58.6 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2352..2425 1610..1682 124 64.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1506..1614 387..495 122 59.5 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 1543..1602 704..764 122 68.9 Plus
roo 9092 roo DM_ROO 9092bp 1103..1166 1309..1372 122 65.6 Plus

BS33488.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.52.fasta performed 2014-03-03 17:26:32 Download gff for BS33488.complete
Subject Subject Range Query Range Percent Splice Strand
wisp-RA 562..4676 22..4136 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 15:31:30 Download gff for BS33488.complete
Subject Subject Range Query Range Percent Splice Strand
wisp-RA 562..4676 22..4136 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 15:31:30 Download gff for BS33488.complete
Subject Subject Range Query Range Percent Splice Strand
X 11894769..11895819 22..1072 100 -> Plus
X 11895877..11897363 1073..2559 100 -> Plus
X 11897432..11897900 2560..3028 100 -> Plus
X 11897954..11898167 3029..3242 100 -> Plus
X 11898224..11898367 3243..3386 100 -> Plus
X 11898656..11898965 3387..3696 100 -> Plus
X 11899030..11899469 3697..4136 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2014-03-03 17:26:32 Download gff for BS33488.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 11788802..11789852 22..1072 100 -> Plus
arm_X 11789910..11791396 1073..2559 100 -> Plus
arm_X 11791465..11791933 2560..3028 100 -> Plus
arm_X 11791987..11792200 3029..3242 100 -> Plus
arm_X 11792257..11792400 3243..3386 100 -> Plus
arm_X 11792689..11792998 3387..3696 100 -> Plus
arm_X 11793063..11793502 3697..4136 100   Plus

BS33488.pep Sequence

Translation from 16 to 4137

> BS33488.pep
MFSTRISGDMKIFAADVAESSVTATCNTSVQQQQSQQLEFRTRMSAGSPS
SKSGQCHLKFGKYNNKTANLLRQVNSCHSSNSSSNTSNNNNEAIKGQQQQ
PLHYCNSNNSHSWARKKYFGNGNSNNSLLQQQQQPSSFFQRQQQQHQMQM
QQEKQATNNNDALMKNQNVVNAHVSDCKSSDSNNNSTSSSNNNSTISSNN
NNTSSASNNNTGSSSSCSNRTKPAKWLNENSSSSSSSNNNNISCRNNNTS
SIDTKRRNSSAGATAAYYRKSESESGSSEGAAESTETEATRTGGCNSNRT
AESSSADGGTQATMGKSQDQEQDQTVKQRPRQQPLSFWKTNYPQTSATQL
KDKETVAAVVSAAAVAAAAAAASASEQQQQQQSLSIEHRRNSGYQQHQQH
NYYPYYYSQPKQLTIASFLQKEMLPDSTEKSSSNTGGSNMIRSSSNGNSN
FSRHQYGHQSTGSGYQQQQQRYRNAQNVYQQYQHQQQHHAQQHTHPHFRR
KHSDNGSGINKKMHYSPPGKSGDPADRSASGQQQHHHPHQQQKTIEILAS
SHFNAMHRRMQGGNNKNGYYQHSYNPMTGEVGSTPTRSEHQNIYNLTYIH
VDTEATGEAASAAGSTPVVKPSLLSKPNISITPASSTTPTTVDRALLPAV
RSVSAPASGSALPAPANHVRNMFPPPPLAMLGGHGLLSPVTTTTPTKMIS
CAQLDEAITAAAASGDKLSTSPSYNQAGHYIMPPQQQQQQQLSSHPIPTG
TSSHPPPPPPPHMFFHFADGFCNPGQGHQAPPATMWPHSSSPCYPASYGS
SCGSGTGAGTSPHNNDGNAGALRPASPALSSSSLGSESQWSGTSNRSRLG
HNGHPSISPTPSALGSAQLSPHLAEMRVQHPLHQQHPPSHASHRPHGQMG
GHAMSSYVPHRPPPPPHPSISSPNPTPVATGAGGPWYEMILPPDRYLAQA
RNIEVTVQPEKLICMCKYDNLSAEIWKRFRGAQQTHNKFKLKMRLWRYLY
LWMHQPMFERYRICLVGSTITGFGTDSSDIDMCLLPEQGVHPHQHQYHQH
HHFHNEKRTEALIILTLFNAVLKDTEVFQDFNLIEARVPILRFKDISNGI
EVDLNFNNCVGIKNTYLLQLYAQMDWRTRPLVVIVKLWAQYHDINDAKRM
TISSYSLVLMVLHYLQHACVPHVLPCLHSLYPEKFQLGQQDCLDLDLIEP
IEPYQALNTQTLGEHLLGFFKYYSTFDFRNFAISIRTGGVLPVSTCRMAK
SPKNDVYQWKELNIEEPFDLSNTARSVYDGPTFERVKAVFLISARRLDHT
LDLATIFRPIHHVPEHFPQLQQHQQQFEQQLHHPISGQQRSAGGGGDGAN
PVPSTLNPDAASTFAETTAAHVA*

BS33488.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 10:04:29
Subject Length Description Subject Range Query Range Score Percent Strand
wisp-PC 1373 CG15737-PC 1..1373 1..1373 7330 100 Plus
wisp-PA 1373 CG15737-PA 1..1373 1..1373 7330 100 Plus
wisp-PB 1372 CG15737-PB 1..1372 1..1373 7313 99.9 Plus
Gld2-PB 1364 CG5732-PB 907..1316 942..1363 984 48.7 Plus
Gld2-PC 1364 CG5732-PC 907..1316 942..1363 984 48.7 Plus