BS33501.complete Sequence
1127 bp assembled on 2015-03-10
GenBank Submission: KX802424
> BS33501.complete
GAAGTTATCAGTCGACATGACTACGCATTTCTACTACCCGAACAAGGAGC
TGCAGGAAGAACTCATCTGCATATCGAAGGCGTTGGTGGCTCCTGGTAAG
GGAATCCTGGCGGCCGACGAGTCCAGTGCAGTGATGGGCAAGCGATTTCA
GTTGATCGGTGTGGAGAACACGGAGGAGAATCGCCGGCTATACCGCCAAA
TGCTATTCACGACCGATCCGAAGATAGCGGAGAATATATCCGGCGTGATA
TTCTACCATGAAACACTGCATCAGCGTACGGATGACGGACTGCCATTCGT
AGAGGCCCTCAGAAAGAAGGGCATCCTGACGGGAATAAAGGTAGACAAGC
ACTTTTCACCACTCTTCGGCTCCGAGGATGAGTTCACCACCCAGGGTCTG
GATGATCTAGCCAATCGATGTGCACAGTACAAGAAGGAGGGCTGCAGCTT
TGCCAAGTGGAGGTGCATCCTGAAGATCACTAAGAATACTCCTTCGCCGC
AGGCCATTTTGGAAAACGCTAATGTCATGGCCCGGTATGCAGCCATCTGT
CAATCGCAGCGACTAGTACCCATCATTAGTCCCGAGGTCCTGGCCACCGG
AGATCATGACTTGGATCGGTGTCAGAAGGTCAACGAAATTCTCCTGGCTG
GAGTATACAAGGCTCTTAGTGATCACCACGTTTTTCTCGAGGGAACTCTT
TTGCAACCCAGCATGGTGATGCCTGGATTGCAGAGCAACAAAAATCATCC
GCCAGCGGATATTGGAGTGGCTACAGTTCTCGCCATTAGGCGAAGTGTTC
CTCCGGCCGTAATGGGAGTACTTTTTTGTGGTGGCGCTCAATCAGAAGAG
GAGGCCACGGTCCATTTGAATGCAATTAACAATGTTCCGCTTTGTAAGCC
TTGGGCCATGACCTTTGCCTTTGATCGGGCTCTTCAAACATCGATTTTGC
GAACTTGGGGTGGCAAGAAGGAGCAGATTAGCCATGCTCAAAATGAACTT
ATCAAGCGGTGCAGGGCCAATGGTCTTGCAAGCATTGGAAAATATGTAAT
TGGCTCTGTGGAAAGTTCAGCGGCCACTGAAAGACTCATTCAAGAAGCCG
TCGAATTCTAAAAGCTTTCTAGACCAT
BS33501.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5432-RB | 1095 | CG5432-PB | 1..1095 | 17..1111 | 5475 | 100 | Plus |
| CG5432-RA | 1095 | CG5432-PA | 1..1095 | 17..1111 | 5475 | 100 | Plus |
| Ald-RM | 1086 | CG6058-PM | 82..701 | 98..717 | 505 | 72.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5432-RB | 1922 | CG5432-RB | 45..1139 | 17..1111 | 5475 | 100 | Plus |
| CG5432-RA | 1983 | CG5432-RA | 45..1139 | 17..1111 | 5475 | 100 | Plus |
| Ald-RM | 2102 | CG6058-RM | 359..978 | 98..717 | 505 | 72.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26414132..26414931 | 17..816 | 4000 | 100 | Plus |
| 3R | 32079331 | 3R | 26414989..26415190 | 815..1016 | 1010 | 100 | Plus |
| 3R | 32079331 | 3R | 26257320..26257939 | 717..98 | 505 | 72.1 | Minus |
| 3R | 32079331 | 3R | 26415252..26415348 | 1015..1111 | 485 | 100 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:07:29 has no hits.
BS33501.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:55 Download gff for
BS33501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5432-RB | 45..1137 | 17..1109 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:55 Download gff for
BS33501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26414132..26414930 | 17..815 | 100 | -> | Plus |
| 3R | 26414990..26415189 | 816..1015 | 100 | -> | Plus |
| 3R | 26415253..26415346 | 1016..1109 | 100 | | Plus |
BS33501.pep Sequence
Translation from 16 to 1110
> BS33501.pep
MTTHFYYPNKELQEELICISKALVAPGKGILAADESSAVMGKRFQLIGVE
NTEENRRLYRQMLFTTDPKIAENISGVIFYHETLHQRTDDGLPFVEALRK
KGILTGIKVDKHFSPLFGSEDEFTTQGLDDLANRCAQYKKEGCSFAKWRC
ILKITKNTPSPQAILENANVMARYAAICQSQRLVPIISPEVLATGDHDLD
RCQKVNEILLAGVYKALSDHHVFLEGTLLQPSMVMPGLQSNKNHPPADIG
VATVLAIRRSVPPAVMGVLFCGGAQSEEEATVHLNAINNVPLCKPWAMTF
AFDRALQTSILRTWGGKKEQISHAQNELIKRCRANGLASIGKYVIGSVES
SAATERLIQEAVEF*
BS33501.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5432-PB | 364 | CG5432-PB | 1..364 | 1..364 | 1884 | 100 | Plus |
| CG5432-PA | 364 | CG5432-PA | 1..364 | 1..364 | 1884 | 100 | Plus |
| Ald-PI | 363 | CG6058-PI | 1..356 | 1..357 | 1289 | 69.5 | Plus |
| Ald-PE | 363 | CG6058-PE | 1..356 | 1..357 | 1289 | 69.5 | Plus |
| Ald-PM | 361 | CG6058-PM | 1..353 | 1..354 | 1285 | 69.8 | Plus |
