BS33502.complete Sequence
1760 bp assembled on 2015-04-29
GenBank Submission: KX800359
> BS33502.complete
GAAGTTATCAGTCGACATGCGCCTTCAGCTGGTGGCCCTTGAACTCCAGG
CCACATCTGGGACAGCCGACGGTCTGTTTGAAGAGATTGCACTAGAGGCG
CTGACGCGGAGTGAATTCAGTGCGAATGTTCAGCCAGACGTCGAAGCTAT
GGCCGCCGCCGCTTTGAGTGGCATGGAAATGGGATCTGGACCAGGATCAG
AGGGATATGAGGATGCCGACAACGAGAAAAGCAAGACCGTGGAAAATGCC
CGCTCCCTAACCTGCTACTGCGATGGCAGTTGTCCGGACAATGTAAGCAA
TGGAACCTGCGAGACCAGACCCGGTGGCAGTTGCTTCAGCGCAGTCCAAC
AGCTTTACGATGAGACGACCGGGATGTACGAGGAGGAGCGTACATATGGA
TGCATGCCTCCCGAAGACAACGGTGGTTTTCTCATGTGCAAGGTAGCCGC
TGTACCCCACCTGCATGGCAAGAACATTGTCTGCTGCGACAAGGAGGACT
TCTGCAACCGTGACCTGTACCCCACCTACACACCCAAGCTGACCACACCA
GCGCCGGATTTGCCCGTGAGCAGCGAGTCCCTACACACGCTGGCCGTCTT
TGGCTCCATCATCATCTCCCTGTCCGTGTTTATGCTGATCGTGGCTAGCT
TATGTTTCACCTACAAGCGACGCGAGAAGCTGCGCAAGCAGCCACGTCTC
ATCAACTCAATGTGCAACTCACAGCTGTCGCCTTTGTCACAACTGGTGGA
ACAGAGTTCGGGCTCCGGATCGGGATTACCATTGCTGGTGCAAAGAACCA
TTGCCAAGCAGATTCAGATGGTGCGACTGGTGGGCAAAGGACGATATGGC
GAGGTCTGGCTGGCCAAATGGCGCGATGAGCGGGTGGCCGTCAAGACCTT
CTTTACGACCGAAGAGGCTTCTTGGTTCCGCGAGACTGAAATCTATCAGA
CAGTGCTGATGCGACACGACAATATCTTGGGCTTCATTGCCGCCGATATC
AAGGGTAATGGTAGCTGGACACAGATGTTGCTGATCACCGACTACCACGA
GATGGGCAGCCTACACGATTACCTCTCAATGTCGGTGATCAATCCGCAGA
AGCTGCAATTGCTGGCGTTTTCGCTGGCCTCCGGATTGGCCCACCTGCAC
GACGAGATTTTCGGAACCCCTGGCAAACCAGCTATCGCTCATCGCGATAT
CAAGAGCAAGAACATTTTGGTCAAGCGGAATGGGCAGTGCGCTATTGCTG
ACTTCGGGCTGGCAGTGAAGTACAACTCGGAACTGGATGTCATTCACATT
GCACAGAATCCACGTGTCGGCACTCGACGCTACATGGCTCCAGAAGTATT
GAGTCAGCAGCTGGATCCCAAGCAGTTTGAAGAGTTCAAACGGGCTGATA
TGTATTCAGTGGGTCTCGTTCTGTGGGAGATGACCCGTCGCTGCTACACA
CCCGTATCGGGCACCAAGACGACCACCTGCGAGGACTACGCCCTGCCCTA
TCACGATGTGGTGCCCTCGGATCCCACGTTCGAGGACATGCACGCTGTTG
TGTGCGTAAAGGGTTTCCGGCCGCCGATACCATCACGCTGGCAGGAGGAT
GATGTACTCGCCACCGTATCCAAGATCATGCAGGAGTGCTGGCACCCGAA
TCCCACCGTTCGGCTGACTGCCCTGCGCGTAAAGAAGACGCTGGGGCGAC
TGGAAACAGACTGTCTAATCGATGTGCCCATTAAGATTGTCTAAAAGCTT
TCTAGACCAT
BS33502.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-04-29 20:18:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tkv-RC | 1728 | CG14026-PC | 1..1728 | 17..1744 | 8640 | 100 | Plus |
| tkv-RA | 1692 | CG14026-PA | 59..1692 | 111..1744 | 8170 | 100 | Plus |
| tkv-RB | 1596 | CG14026-PB | 1..1596 | 149..1744 | 7980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tkv-RC | 2885 | CG14026-RC | 65..1792 | 17..1744 | 8640 | 100 | Plus |
| tkv-RB | 3129 | CG14026-RB | 402..2036 | 110..1744 | 8175 | 100 | Plus |
| tkv-RA | 2846 | CG14026-RA | 120..1753 | 111..1744 | 8170 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5220093..5221401 | 1744..436 | 6545 | 100 | Minus |
| 2L | 23513712 | 2L | 5221463..5221651 | 436..248 | 945 | 100 | Minus |
| 2L | 23513712 | 2L | 5241369..5241506 | 248..111 | 690 | 100 | Minus |
| 2L | 23513712 | 2L | 5243980..5244075 | 112..17 | 480 | 100 | Minus |
| X | 23542271 | X | 15472950..15473022 | 40..112 | 245 | 89 | Plus |
| 2R | 25286936 | 2R | 8959513..8959637 | 884..1008 | 190 | 76.8 | Plus |
Blast to na_te.dros performed on 2015-04-29 20:18:30 has no hits.
BS33502.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:59 Download gff for
BS33502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tkv-RC | 65..1790 | 17..1742 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:59 Download gff for
BS33502.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5243982..5244075 | 17..110 | 100 | | Minus |
| 2L | 5220095..5221400 | 437..1742 | 100 | <- | Minus |
| 2L | 5221463..5221650 | 249..436 | 100 | <- | Minus |
| 2L | 5241369..5241506 | 111..248 | 100 | <- | Minus |
BS33502.pep Sequence
Translation from 16 to 1743
> BS33502.pep
MRLQLVALELQATSGTADGLFEEIALEALTRSEFSANVQPDVEAMAAAAL
SGMEMGSGPGSEGYEDADNEKSKTVENARSLTCYCDGSCPDNVSNGTCET
RPGGSCFSAVQQLYDETTGMYEEERTYGCMPPEDNGGFLMCKVAAVPHLH
GKNIVCCDKEDFCNRDLYPTYTPKLTTPAPDLPVSSESLHTLAVFGSIII
SLSVFMLIVASLCFTYKRREKLRKQPRLINSMCNSQLSPLSQLVEQSSGS
GSGLPLLVQRTIAKQIQMVRLVGKGRYGEVWLAKWRDERVAVKTFFTTEE
ASWFRETEIYQTVLMRHDNILGFIAADIKGNGSWTQMLLITDYHEMGSLH
DYLSMSVINPQKLQLLAFSLASGLAHLHDEIFGTPGKPAIAHRDIKSKNI
LVKRNGQCAIADFGLAVKYNSELDVIHIAQNPRVGTRRYMAPEVLSQQLD
PKQFEEFKRADMYSVGLVLWEMTRRCYTPVSGTKTTTCEDYALPYHDVVP
SDPTFEDMHAVVCVKGFRPPIPSRWQEDDVLATVSKIMQECWHPNPTVRL
TALRVKKTLGRLETDCLIDVPIKIV*
BS33502.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-04-29 20:18:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tkv-PC | 575 | CG14026-PC | 1..575 | 1..575 | 3025 | 100 | Plus |
| tkv-PA | 563 | CG14026-PA | 12..563 | 24..575 | 2888 | 98.9 | Plus |
| tkv-PB | 531 | CG14026-PB | 1..531 | 45..575 | 2817 | 100 | Plus |
| tkv-PD | 509 | CG14026-PD | 7..509 | 73..575 | 2652 | 99.2 | Plus |
| babo-PB | 622 | CG8224-PB | 120..617 | 72..565 | 1045 | 43.7 | Plus |
