BS33506.complete Sequence
1526 bp assembled on 2015-03-10
GenBank Submission: KX804149
> BS33506.complete
GAAGTTATCAGTCGACATGGCTAACAAAGGACACTTTATCGAGAGGAATG
GGGCCTTTCGTGCTGCCGGATTGCCCTCCTTCGGGGACGATAAGATTTCT
TTCAAGGATTGCGTGATCATTGCCCATCCGTCGGAGGAAATTCGTCATCA
GTTAGAATTGGAGTGCAGAAGAAACAAGCCTCAACCCTTCGGAAAACTAT
CGCCAATTCTGCCGGAGAGCAAAATGGGCGAACTTCTTAGCAGCGAGGGT
CAAAAGTCACGTGTGGCTGTGTTCAAGGAGAAGTTTCTGGAGGATATGTA
CTGTAAGTTTGGAAAAACCGGACAAATACAGCCGACGCACTCGAAACCCG
ATGATGTCACCAATTGGAGTCATACTTTCGGACGCGCCAATCCTCCAGCG
GAAACGTTATATAGCACTATAATGCCGAAAAAATCGGCCGATCAGGTTAA
TCGCGAATATGCCGAGTTTCATCGAGGTCACATCGTTAGTAACAACCATT
ACTTTCCATCTGAGCAGATCAATCGCAGATATGATAAGCCCTTTGATCGA
TTGAATACCTATGGAGTTTTGCAAGGCGCCGAGCACAGTGGTTCGACCAT
GAAGAAATGTTTAATGCAAGGTGACGAGCATTTAACAGTGGTCTCAAAAC
CGTGGATGGATTATGTACAAAAAACCAAAGCTCCTTTGGGTAAAAAATAC
GAAAAATACTTAGATAAAGTGCCGGACGTGTTCTTTGGCTATCGTCCCCA
TACGGACAAGTGCACCATTAGAATGTTGCTGGAGGACATTAGGCCGTGTG
AAGAGGACAATTCTTTGGTGATGGCTCTATCCTATTTGAATCGACTGCGT
GAGAGTCTTCACAAGCGGAATGACTTCTATATGATGGATCTGATAGCATC
GCTGGAGAGAGAGGATAAGGAGCATACGGGTCACATGCCCCTCTCGCAGA
TCCTTGGGACCATGTACAAGCTGCACATCCGTGTGGATGCGGCGAAAATT
CGTACCATGTTGTCGCATTTCGGTAAGATCCTCGACGAGGGCTGTCCCAC
GGAGCGGGTGAACTACGATCACTTTTGCCGTATACTCTCCGTTCAGCAAC
CGCTGCCGAATGTCGGATGTATTGGCCATATTCCGGATAACATGTACAAC
AAGGAAACTACGTATACAAAACTATGCAAGGATCGCATGGCAGATATACC
TGTGTCGCCGGAATTTAACTGGCCAAACCGGAGTGCTCATCGTACGGACG
ATATCAACACACATGTGAAGGATGTCATACAACCGGAACTGCCAATAAAA
GTTGGCCTCAGACCCAGCGACAAGACTTGGCCACGGAGCAAGGATCAAAT
AGAGCGAATATTCGATAATATTGTCTCCAAGGATGCGTTCGAAAATATTT
GGCAGCGTATAATGGCAAAGAAGAAGACCAATGATCAGGATCTAAAGGAA
TTGGCATCTGTCGCACAGTTTCGTGCTGCAATGAACTGCGAAATGCATGC
ATCTACATAAAAGCTTTCTAGACCAT
BS33506.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33489-RB | 1494 | CG33489-PB | 1..1494 | 17..1510 | 7425 | 99.8 | Plus |
| CG33489-RA | 1494 | CG33489-PA | 1..1494 | 17..1510 | 7425 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33489-RB | 1620 | CG33489-RB | 65..1560 | 17..1512 | 7435 | 99.8 | Plus |
| CG33489-RA | 1751 | CG33489-RA | 196..1691 | 17..1512 | 7435 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11574824..11575630 | 1512..706 | 4020 | 99.9 | Minus |
| 3L | 28110227 | 3L | 11576338..11576849 | 528..17 | 2560 | 100 | Minus |
| 3L | 28110227 | 3L | 11575841..11576019 | 705..527 | 865 | 98.9 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:07:34 has no hits.
BS33506.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:57 Download gff for
BS33506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33489-RB | 65..1556 | 17..1508 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:57 Download gff for
BS33506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11574828..11575630 | 706..1508 | 99 | <- | Minus |
| 3L | 11575841..11576017 | 529..705 | 98 | <- | Minus |
| 3L | 11576338..11576849 | 17..528 | 100 | | Minus |
BS33506.pep Sequence
Translation from 16 to 1509
> BS33506.pep
MANKGHFIERNGAFRAAGLPSFGDDKISFKDCVIIAHPSEEIRHQLELEC
RRNKPQPFGKLSPILPESKMGELLSSEGQKSRVAVFKEKFLEDMYCKFGK
TGQIQPTHSKPDDVTNWSHTFGRANPPAETLYSTIMPKKSADQVNREYAE
FHRGHIVSNNHYFPSEQINRRYDKPFDRLNTYGVLQGAEHSGSTMKKCLM
QGDEHLTVVSKPWMDYVQKTKAPLGKKYEKYLDKVPDVFFGYRPHTDKCT
IRMLLEDIRPCEEDNSLVMALSYLNRLRESLHKRNDFYMMDLIASLERED
KEHTGHMPLSQILGTMYKLHIRVDAAKIRTMLSHFGKILDEGCPTERVNY
DHFCRILSVQQPLPNVGCIGHIPDNMYNKETTYTKLCKDRMADIPVSPEF
NWPNRSAHRTDDINTHVKDVIQPELPIKVGLRPSDKTWPRSKDQIERIFD
NIVSKDAFENIWQRIMAKKKTNDQDLKELASVAQFRAAMNCEMHAST*
BS33506.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33489-PB | 497 | CG33489-PB | 1..497 | 1..497 | 2673 | 100 | Plus |
| CG33489-PA | 497 | CG33489-PA | 1..497 | 1..497 | 2673 | 100 | Plus |
| CG33490-PA | 530 | CG33490-PA | 1..524 | 1..489 | 960 | 40.6 | Plus |
| CG32086-PA | 491 | CG32086-PA | 1..488 | 1..495 | 947 | 44 | Plus |
| CG32086-PB | 475 | CG32086-PB | 1..472 | 1..495 | 896 | 42.7 | Plus |
