BS33507.complete Sequence
782 bp assembled on 2015-03-10
GenBank Submission: KX803602
> BS33507.complete
GAAGTTATCAGTCGACATGAGGGTGCACCTGAATGGTCGCGAGGTCCGGG
AGCTGTTGCGAAAGGATTTGCTGGTGCGATGGCGACAGAAAGGGCTGAGT
CTGATCCTGTTGGCCTGGCCAGTGATGGTCTTTATGCTGCTCTATCTGAT
CCGTCTGAAGTACGGATCGGAGGAGTTGGAGGCCTGCCAGTATCCCACTC
GCCTGCTGCCCACCAAGAACCAAGTGGTTCCCGCTGCCTTCTCCTACATA
TGCAGTATTGAGAACCGCTGCCAGCCGGCGCATCCTTACGAGGAGTATTC
CCATTGGAAGGAGGCGCCACTGCACTCCGTGATCGATGTGGTCAACGCGT
TCGTAACCGACGAACGGCTCCACAAGGCCGTCGTGGAGCTGGCCGAAAAG
GCCAACTTTGTGTCGGCCATAACTACATTGATCACCAGTGATCGGTTCGA
CATCATACGAAGTAACATAAGTGAAATAATTTCCCTCGTGCCCGAAATCG
AACGACGAATGAACTACAGCTTCGACATCAAACATTTGTTTTCGAATCGC
GAAACCTTCGTGAAGTTGGGCGTTCTTTTGTGTGGTCATCCGTTTCCCAA
TACCGATACTATACCGTTGGTCAATGAAATCCTGGAATCCGAGGACTTTA
GCCAGGCCAACGATGCAGAGATCGATGCAATGCCCACCCGTCGTCGTCGT
CGATACGAAGATCTTCCCACGGACTGGAGGCCAAGTGAGCATGACCAAAT
ATTTTTTAATATTTGAAAGCTTTCTAGACCAT
BS33507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34120-RB | 750 | CG34120-PB | 1..750 | 17..766 | 3735 | 99.9 | Plus |
| CG34120-RE | 5997 | CG34120-PE | 1..718 | 17..734 | 3575 | 99.9 | Plus |
| CG34120-RC | 5994 | CG34120-PC | 1..718 | 17..734 | 3575 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34120-RB | 980 | CG34120-RB | 197..948 | 17..768 | 3745 | 99.9 | Plus |
| CG34120-RE | 7388 | CG34120-RE | 568..1285 | 17..734 | 3575 | 99.9 | Plus |
| CG34120-RC | 6688 | CG34120-RC | 568..1285 | 17..734 | 3575 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21132451..21132752 | 17..318 | 1510 | 100 | Plus |
| X | 23542271 | X | 21132805..21132951 | 319..465 | 720 | 99.3 | Plus |
| X | 23542271 | X | 21133328..21133468 | 546..686 | 705 | 100 | Plus |
| X | 23542271 | X | 21133187..21133270 | 462..545 | 420 | 100 | Plus |
| X | 23542271 | X | 21133548..21133629 | 687..768 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:07:36 has no hits.
BS33507.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:59 Download gff for
BS33507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34120-RB | 197..945 | 17..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:59 Download gff for
BS33507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21132451..21132752 | 17..318 | 100 | -> | Plus |
| X | 21132805..21132947 | 319..461 | 99 | -> | Plus |
| X | 21133187..21133270 | 462..545 | 100 | -> | Plus |
| X | 21133328..21133468 | 546..686 | 100 | -> | Plus |
| X | 21133548..21133626 | 687..765 | 100 | | Plus |
BS33507.pep Sequence
Translation from 16 to 765
> BS33507.pep
MRVHLNGREVRELLRKDLLVRWRQKGLSLILLAWPVMVFMLLYLIRLKYG
SEELEACQYPTRLLPTKNQVVPAAFSYICSIENRCQPAHPYEEYSHWKEA
PLHSVIDVVNAFVTDERLHKAVVELAEKANFVSAITTLITSDRFDIIRSN
ISEIISLVPEIERRMNYSFDIKHLFSNRETFVKLGVLLCGHPFPNTDTIP
LVNEILESEDFSQANDAEIDAMPTRRRRRYEDLPTDWRPSEHDQIFFNI*
BS33507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34120-PB | 249 | CG34120-PB | 1..249 | 1..249 | 1300 | 100 | Plus |
| CG34120-PC | 1997 | CG34120-PC | 1..242 | 1..242 | 1250 | 98.8 | Plus |
| CG34120-PE | 1998 | CG34120-PE | 1..242 | 1..242 | 1250 | 98.8 | Plus |
| CG34120-PD | 1981 | CG34120-PD | 1..234 | 1..233 | 1165 | 97 | Plus |
