BS33509.complete Sequence
1106 bp assembled on 2015-03-10
GenBank Submission: KX804036
> BS33509.complete
GAAGTTATCAGTCGACATGTTGCGCAGAGGCTTTTTATCTCGCATCAACG
CAGCCCAATGGAGCCGCCAAATGTCGGTGGTGGCCAAGTCCTTGAAGTAC
ACACAGCACGGCGAACCACAGGAGGTTCTGCAACTGGTGGAGGACAAACT
TCCCGATCCCAAGGACAATCAGGTGCTGGTGAAGATTCTGGCAGCTCCCA
TTAACCCGGCGGACATAAACACCATTCAGGGTAAATACCCGGTGAAGCCC
AAGTTTCCAGCCGTTGGCGGCAATGAGTGTGTGGCGGAGGTCATCTGCGT
GGGCGACAAAGTCAAAGGCTTTGAGGCAGGACAGCACGTCATTCCCTTGG
CCAGTGGCCTGGGCACCTGGACCACCCATGCCGTCTACAAGGAGGATCAA
CTATTGATCGTGTCCAAGAAGGTTGGCTTGGCGGAGGCCGCCACCTCGAC
AGTGAATCCCACCACTGCCTACCGAATGCTAAAGGACTTTGTGCAGCTCT
GTCCGGGTGACACGGTCATCCAAAACGGCGCCAATAGCGCCGTCGGCCAG
GCAGTGCACCAATTGTGCCGAGCCTGGGGCATCAATAGCGTTGGCATTGT
ACGCGACCGCCCAGAAATTGCCGAATTGAAGCAGATGCTGCAGTGCCTGG
GAGCCACCGAGGTCCTAACAGAGGCCGAAATTCGCACCAGTGACATCTTC
AAGTCGGGCAAGTTGAAAAAGCCCCGTCTGGCCTTCAACTGTGTGGGCGG
AAAAAGCGCCACGGAGGTGTCGCGTCATCTAGACAATGGCGGAGTGCTGG
TCACCTACGGCGGAATGTCCCGCGAACCCGTCACAGTGGCCACTGGACCC
CTCATTTTCAAGGACATTGCATTTAGAGGCTTCTGGATGACTCGCTGGTC
CAAGGAGAACTACAGTTCACCAGAGCGTTCGAAAATGTTCAAGGAGATCT
TCGAGCTGATGGAGCAGGGAAAGTTCGTGGCCCCCAACCATGAGATGGTG
CCCTTGGCAAAGTTCAAAGACGCGGCGGCCGCTGCCTTGAGCTTCAAGGG
ATTCACCGGCAAGAAGTACATACTGGATATGAGCATTTAGAAGCTTTCTA
GACCAT
BS33509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16935-RB | 1074 | CG16935-PB | 1..1074 | 17..1090 | 5340 | 99.8 | Plus |
| CG16935-RA | 1074 | CG16935-PA | 1..1074 | 17..1090 | 5340 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16935-RB | 1244 | CG16935-RB | 89..1163 | 17..1091 | 5345 | 99.8 | Plus |
| CG16935-RA | 1316 | CG16935-RA | 161..1235 | 17..1091 | 5345 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13860430..13861291 | 1091..230 | 4310 | 100 | Minus |
| 2R | 25286936 | 2R | 13861626..13861842 | 233..17 | 1055 | 99.1 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:07:39 has no hits.
BS33509.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:01 Download gff for
BS33509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16935-RB | 94..1162 | 22..1090 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:01 Download gff for
BS33509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13861629..13861837 | 22..230 | 99 | | Minus |
| 2R | 13860431..13861290 | 231..1090 | 100 | <- | Minus |
BS33509.pep Sequence
Translation from 16 to 1089
> BS33509.pep
MLRRGFLSRINAAQWSRQMSVVAKSLKYTQHGEPQEVLQLVEDKLPDPKD
NQVLVKILAAPINPADINTIQGKYPVKPKFPAVGGNECVAEVICVGDKVK
GFEAGQHVIPLASGLGTWTTHAVYKEDQLLIVSKKVGLAEAATSTVNPTT
AYRMLKDFVQLCPGDTVIQNGANSAVGQAVHQLCRAWGINSVGIVRDRPE
IAELKQMLQCLGATEVLTEAEIRTSDIFKSGKLKKPRLAFNCVGGKSATE
VSRHLDNGGVLVTYGGMSREPVTVATGPLIFKDIAFRGFWMTRWSKENYS
SPERSKMFKEIFELMEQGKFVAPNHEMVPLAKFKDAAAAALSFKGFTGKK
YILDMSI*
BS33509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16935-PB | 357 | CG16935-PB | 1..357 | 1..357 | 1845 | 100 | Plus |
| CG16935-PA | 357 | CG16935-PA | 1..357 | 1..357 | 1845 | 100 | Plus |
