BS33510.complete Sequence
785 bp assembled on 2015-03-10
GenBank Submission: KX806294
> BS33510.complete
GAAGTTATCAGTCGACATGAGCCGACATCGCTTCAACAACGTGCAGATCA
AGGCATTGCCCGGTGGTCTGATGGCCCACCACGAACCGGATGCGGATGGC
GGACAGCCCGGTTCGCAGAAGCTGCCCATGTGGCCCAGTGAACGCATTCC
TCCTGGCGGTGCTGGAGCCTTCCACTCGGCCAAGGTGCAATATAGCAAGG
AGACAGCTGATCTGATCCGATTGCTTGTCAAGGAGTCCAAGATGTCGATG
TTGGTACGCAAGCAGATCGATGAGAGCCTGCGCAATGGGGAGCCATTGCC
ATTGCCCGAACCGCCGCGTCCCAATACCAACAACGATCCTGACAAGGAGA
CACTGGCCATTTTGGATCGGGCACGCAATGCCAAGCGTAAGAATCTACGG
CAGATCGAGGCGAGCGGAGCCTACAAGCAGAGCTATTACCGCCCGCCCGC
CGACAACCGAATGCATGGAGAGAAGGCCAAGTCGCAGCTGCAGTTCACCA
TGGCCGGCACTCATTTGCCCGATCCGGCGATCAAGCCGCGACGTCGTCCT
CGCGAAGAGCAACTGGTGACGGAGGAGGATCTCATAAACGAGCTTTTGGA
CCAAATCAACGAGCGTGCCGAGTGGTTGACGGAAATGGAGTCCATGGGCC
AGGGTAAGAAGTATCGCCCAGAGATTCGTGATCAGATTGCCGAACGTCTG
CGTCGCATTCAGGCGCTGGAGTCCAAGATGAAGATGAAGTCCAATGGCGG
CTTCCGTTTCGTGGACTAAAAGCTTTCTAGACCAT
BS33510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5280-RA | 753 | CG5280-PA | 1..753 | 17..769 | 3660 | 99.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5280-RA | 986 | CG5280-RA | 96..849 | 17..770 | 3665 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 8989449..8989820 | 593..222 | 1800 | 98.9 | Minus |
| 3L | 28110227 | 3L | 8989929..8990133 | 221..17 | 1025 | 100 | Minus |
| 3L | 28110227 | 3L | 8989206..8989382 | 770..594 | 840 | 98.3 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:07:23 has no hits.
BS33510.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:10:51 Download gff for
BS33510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5280-RA | 96..846 | 17..767 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:10:51 Download gff for
BS33510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 8989209..8989382 | 594..767 | 98 | <- | Minus |
| 3L | 8989449..8989820 | 222..593 | 98 | <- | Minus |
| 3L | 8989929..8990133 | 17..221 | 100 | | Minus |
BS33510.pep Sequence
Translation from 16 to 768
> BS33510.pep
MSRHRFNNVQIKALPGGLMAHHEPDADGGQPGSQKLPMWPSERIPPGGAG
AFHSAKVQYSKETADLIRLLVKESKMSMLVRKQIDESLRNGEPLPLPEPP
RPNTNNDPDKETLAILDRARNAKRKNLRQIEASGAYKQSYYRPPADNRMH
GEKAKSQLQFTMAGTHLPDPAIKPRRRPREEQLVTEEDLINELLDQINER
AEWLTEMESMGQGKKYRPEIRDQIAERLRRIQALESKMKMKSNGGFRFVD
*
BS33510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5280-PA | 250 | CG5280-PA | 1..250 | 1..250 | 1305 | 100 | Plus |
