BS33518.complete Sequence
1310 bp assembled on 2015-03-10
GenBank Submission: KX804096
> BS33518.complete
GAAGTTATCAGTCGACATGGAGTGCGAAAAATGTGATATCACCAGCAATG
CCGGTGACCATAGGCTTAATTTGACACGGAGTCTGTCGGACCTTAAACCG
GAAACCACTCTGGAGATGGAGATTGATGAGGCTCTGTCCTCCAGTAGTGC
CGATGACACTCCGCCGGGCATGATCGTTGTGGAGACCCGCATCAGTTCCT
GGCAGAAGGTGAAGTGCTATGACAAGGATGGTACGACAGCAGATGCGGAG
GATCCACAGATACCGGCCTGCTCCCTGGGCCTAAAGCCAAATGTTCAGTT
CCAGAAGCTACCGCACCCAAGTCATCCTCTGGTCAGCACCGAGGCCGTCC
TGGCCGCCGCCACCAGCTCCTCCTATTCCGCTGGCCCACCCAAAGCCGCG
GCCACAGACTCCATTGCCACGTTGCGGCACTGCGTCGATGGTGCCACCCA
GTGCAATAACCTGAATTACGAGTCCGCATCCAACGAATCGATGCCCTCGG
TGGGATCGCTCGTCTGTCGCATTTGTCACAATGCCGATAATCCCGAACAA
CTCGTGTCGCCGTGTTTGTGCAAGGGCTCGCTGACATATGTCCATGTTCA
CTGCCTGGAGTGTTGGATTAGCACCTCGCGCTGCACCACCTGCGAGCTGT
GCCAGTTCCAGTACAATACGGAACAGACTCTGCGGTACACCTGCCTGCAG
TCGCTGCGCCTGTGGTACTCAAGGGCCATGAGTCGCAGGGCACTGCAGGA
GGACTGCCAGATGTTCTCGCTGCTCACCTTGGTGGCATTCGGAATTATCG
GTACCCTGCTGGTAGGCATCCAGTATTACGCCCTGCACACCCACTCTTGG
GGATTGAGTAAGCTGTGGACCAAGTCCTGGATGCTGTTCTTCCTGTTCAT
GACGATCACCGTTTACTTTGCTAACATTTACATGCTGATCAAGTCCCAGC
TGACGCCATGGTATCGCTGGTGGCAATCTGCGCGTGACATTAAACTTATC
CTGGAGAACCGACGACCGTTTCCGAACCCAAGCCGCTTTTTGCGGTCATT
TCAATTGGAGACGGTATCGACGACAGCCTCCATGTACACCCACCACGATC
AGCAGGAAGCACCAGTGCCCAGCTCCTCGCCGGTCATCGTGATCACCTCC
AGCGAGGAGGAGACGGAGGATAAGTTGGCCCACAAATGGGGAACGCGGCT
GGACAGTGAAGTGCTGGCCGCAGTAGTGGCAGCCACAGTGGAATCGATTG
CTGACGCAAGTGCCCGAGAGAGTGACAAACAGGACGAGGACTAGAAGCTT
TTTAGACCAT
BS33518.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13442-RA | 1278 | CG13442-PA | 1..1278 | 17..1294 | 6300 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13442-RA | 1633 | CG13442-RA | 110..1391 | 17..1298 | 6305 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20729913..20730427 | 549..35 | 2575 | 100 | Minus |
| 2R | 25286936 | 2R | 20728071..20728403 | 1298..966 | 1590 | 98.5 | Minus |
| 2R | 25286936 | 2R | 20728577..20728797 | 904..684 | 1075 | 99.1 | Minus |
| 2R | 25286936 | 2R | 20729172..20729309 | 687..550 | 690 | 100 | Minus |
| 2R | 25286936 | 2R | 20728467..20728529 | 966..904 | 315 | 100 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:07:46 has no hits.
BS33518.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:05 Download gff for
BS33518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13442-RA | 110..1387 | 17..1294 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:05 Download gff for
BS33518.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20728075..20728402 | 967..1294 | 98 | <- | Minus |
| 2R | 20728467..20728528 | 905..966 | 100 | <- | Minus |
| 2R | 20728577..20728796 | 685..904 | 99 | <- | Minus |
| 2R | 20729175..20729309 | 550..684 | 100 | <- | Minus |
| 2R | 20729913..20730426 | 36..549 | 100 | <- | Minus |
| 2R | 20730483..20730501 | 17..35 | 100 | | Minus |
BS33518.pep Sequence
Translation from 16 to 1293
> BS33518.pep
MECEKCDITSNAGDHRLNLTRSLSDLKPETTLEMEIDEALSSSSADDTPP
GMIVVETRISSWQKVKCYDKDGTTADAEDPQIPACSLGLKPNVQFQKLPH
PSHPLVSTEAVLAAATSSSYSAGPPKAAATDSIATLRHCVDGATQCNNLN
YESASNESMPSVGSLVCRICHNADNPEQLVSPCLCKGSLTYVHVHCLECW
ISTSRCTTCELCQFQYNTEQTLRYTCLQSLRLWYSRAMSRRALQEDCQMF
SLLTLVAFGIIGTLLVGIQYYALHTHSWGLSKLWTKSWMLFFLFMTITVY
FANIYMLIKSQLTPWYRWWQSARDIKLILENRRPFPNPSRFLRSFQLETV
STTASMYTHHDQQEAPVPSSSPVIVITSSEEETEDKLAHKWGTRLDSEVL
AAVVAATVESIADASARESDKQDED*
BS33518.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13442-PA | 425 | CG13442-PA | 1..425 | 1..425 | 2249 | 100 | Plus |
| CG4080-PB | 617 | CG4080-PB | 25..239 | 148..379 | 192 | 26.9 | Plus |
| CG4080-PA | 617 | CG4080-PA | 25..239 | 148..379 | 192 | 26.9 | Plus |
