BS33530.complete Sequence
1514 bp assembled on 2015-03-10
GenBank Submission: KX801084
> BS33530.complete
GAAGTTATCAGTCGACATGGAGCAGCTCTTTGAGTTCCCGGCTCGTGCGA
TGGGTCTGGGATTGGTCCAGATGCCGCAGATGCAGATACCAATCCCATGT
AGGAGGGAGTACTCGCTAAATCCGAACGCAGTGGAATTCGTGCCATCTTT
TCGCCAGAAATCCGAGCCTCCAAGTCCATCGACCAAAACGGAGGCGACCT
CAACTACAACATTGCTGCGTCCCGAGGTCGTTGGTGATGCCGTGAATCGT
GTTGAAAATGGGATTTTTCTCGAGCGCCAGATCTTTGACACCCTAAGTCA
ACTGGGAGACGAGCAAATGCCTCTGGAAGAGATCGCGGTTGGTGTATTAC
CAGGAGGACAAGGTCTTAGTATGACTTTCACCACCAAAGAGCACGATCAG
ATGCAGCCTTTGGACCGAAATACTCTAGTAAACCACAGTAAACAGTGCCT
TCAGCTGGCTGTGGGCGATCAGGCGAAGTTGGCGAACAGACCTGAGACCG
TCCTAATTGCCCAATTCCTCATCCGGGTCAACGATCTTTTGAACGAGAAG
TATGAATACGGTGGCGATGGATCCGTGTGTCCCAGGTGCACCCTGTGCTC
AAATCGCAGCTATACGGAGCTGGAAATCGAAAACCAAATCGAGTGCATAA
AGGCTTTTGAGAAATTTTTCACCTTTACGGAATCAACTCGCTACCAAGAC
ATAGTTTCTCACAAAGCCTTTAAGGAGCTGTGCCACAGGCTGGGTTTGAT
CGTAAGCCGAGATCAGATCCAGGTTAACCGCCCCTCCACAGTGGTCCCTC
CACCCACGGCACAGTCATCTAGTATAACCCTTTGCATGTCCAAGAACGAA
ATGGAATCTAATGTAGAGGCCAAGGCTTATAGAGGAGATGACGAATCCAG
TTTCAACGGTTGTGAACTGACCGCGAATGGAGGTCAACATCCATCTATTT
CTAATGAATATTTGAGGGGAAAGCTTTACAGATACGAAGACTCTCAGGGA
TGCCAGTTGGTCAACGAACTGAGTGAAAATCAACAAAAAATTGAAGCTAT
GGAGGTAGATGAGTTCGAGTTGGATTTACCATCTACCACGAAGCCCAAGA
CCGTGGTAACTACTAGTGTGCCGACAACCTTTCCTCGGGTGTACAAAACA
GCCAAAGCCAAATGCTCGGCTCGTGGGGCAGGATCTAGTGGTCAACAGAG
TGGCTACAATAACAGGGCAGTCCGTTCAATGATGCAGCCGTCAAAGGGCT
CACCCACGACTTCACATTTTCGGACTATTGCAGTTGGTTGCCACCACCAA
GCTGGATCGGCTGCCCCTCGAAAGCTGCAAATGGATTCGTGTCCAACTGG
GGCTGCCCGCAAGCAAAATAGGTTGACTGAAGCAAAATCAAAAATTTATC
AGCCATCTGGCAGTTCGCAACGACTTTCAACAGGTCGCGATACAAAACTA
GGAAAATCTGGTACAAACGTACAAAAACCCAAGTTAAATCATATGTGAAA
GCTTTCTAGACCAT
BS33530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6441-RC | 1482 | CG6441-PC | 1..1482 | 17..1498 | 7320 | 99.6 | Plus |
| CG6441-RA | 1677 | CG6441-PA | 1..1485 | 17..1501 | 7305 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6441-RC | 1730 | CG6441-RC | 204..1685 | 17..1498 | 7320 | 99.6 | Plus |
| CG6441-RA | 1993 | CG6441-RA | 204..1688 | 17..1501 | 7305 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7474907..7475871 | 17..981 | 4780 | 99.7 | Plus |
| 2L | 23513712 | 2L | 7475930..7476448 | 980..1498 | 2550 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:07:53 has no hits.
BS33530.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:09 Download gff for
BS33530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6441-RC | 204..1684 | 17..1497 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:09 Download gff for
BS33530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7474907..7475871 | 17..981 | 99 | -> | Plus |
| 2L | 7475932..7476447 | 982..1497 | 99 | | Plus |
BS33530.pep Sequence
Translation from 16 to 1497
> BS33530.pep
MEQLFEFPARAMGLGLVQMPQMQIPIPCRREYSLNPNAVEFVPSFRQKSE
PPSPSTKTEATSTTTLLRPEVVGDAVNRVENGIFLERQIFDTLSQLGDEQ
MPLEEIAVGVLPGGQGLSMTFTTKEHDQMQPLDRNTLVNHSKQCLQLAVG
DQAKLANRPETVLIAQFLIRVNDLLNEKYEYGGDGSVCPRCTLCSNRSYT
ELEIENQIECIKAFEKFFTFTESTRYQDIVSHKAFKELCHRLGLIVSRDQ
IQVNRPSTVVPPPTAQSSSITLCMSKNEMESNVEAKAYRGDDESSFNGCE
LTANGGQHPSISNEYLRGKLYRYEDSQGCQLVNELSENQQKIEAMEVDEF
ELDLPSTTKPKTVVTTSVPTTFPRVYKTAKAKCSARGAGSSGQQSGYNNR
AVRSMMQPSKGSPTTSHFRTIAVGCHHQAGSAAPRKLQMDSCPTGAARKQ
NRLTEAKSKIYQPSGSSQRLSTGRDTKLGKSGTNVQKPKLNHM*
BS33530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6441-PC | 493 | CG6441-PC | 1..493 | 1..493 | 2558 | 100 | Plus |
| CG6441-PA | 558 | CG6441-PA | 1..493 | 1..493 | 2554 | 99.8 | Plus |
