BS33531.complete Sequence
1637 bp assembled on 2015-04-29
GenBank Submission: KX805991
> BS33531.complete
GAAGTTATCAGTCGACATGAACATGCAGCAGTTTGCACCCAATCCGAACA
ACATGATGCAGCAGAATGCCATGTTACAACAGCAGCAGCAGCAGCAGATG
CAGCAAATGGGCAACAACCCGATGCAGCAGCAGCTGAATGTGGGCGGTGG
GAACGGGCAGCCAAATCCCCAGATGAACTTCATGCAGCAGGGACCAGGTG
GCGGTGGAGCCGGACCGCAGGGTATGCCTGGCCAGCAGCAACAGTGGCAC
AATGCGCCGCAGCAGCAGCAGCCGCCACAACCGTACCACAACCAATACGC
TCCGCATCAGCAGAACATGCAGTCAAATCGCATCGAGCGCCCGCCGTTGA
ATGCCAACTCCAAGCAGGCGCTATCACAGATGCTACGACAACGACAACCA
TTCCAGCAGCAAGCGCAACAGGGTCCGGGGGGTGGTTTCAATCCGATGCA
GCAACAACCACAGGCTTCGCAACAACAGCCCGGTCCTCAGCAGCAGATGA
ACCCCAACCAAATGCGCCAGCAGCAAATGAATCCCCAGCAAAATCCTCAG
TCTGTCGCTGCATTCAACGCCATGCAGCAGCAGCCGCAGCAGAACGCCCA
GCAGCAACAGATGAATCCCAACCAGCAGCAACAGCAGCAGTTCATGCGCG
GCGGCAACATGCGACCCGGCATGGCGCCCAACCAGATGAATCAGATGAAC
ATGGGAGGTCAAGGCATGTCGCAGAATCCGATGATGCAGCAACAAATCCC
ACAGAATATGGTGGGCATGGTCAACCCGAATGCCAACCAAATGATGCAGA
GCGGTGGAGCTCAGGGAGGCAACGGTGTGGGCGTTGGTGTTGGCGTCGGC
GTTGGCGGTGCCGGCAACAATCCCAACATGGGCATGGGAGGCATGCCTCA
GCAAGGCATGATACAACAGCAGCCGCAGCAACAGCCGCAGCAGCAGGTGC
AGTTCCAGAACTTCCAGAATCAGTACCAGCAGCAGCAACAGCAGGGCATG
CAGCAACAGGGCGGTGGAGCAGGCGTTGGAGTGGGCGTCGGCATGGCGCC
CAATCAGCAGCAACAGCAGCAGGCCAACATGATGGGCAACTTCAATCCGC
AGATGCAGCAGGGGAATCGCAACAATCCCGACTTTATGGCCGCCGCAGCG
GTTGCCCAGCAGCAGCAACAACAACAACAGCAACAGCGCGTTGTTCCCGG
AGGAATGATGGCCGGCAACCGGAACCAGTACATGAACCAGGCGCCCAACG
TAACCATGTCCACCATGATGGGTCCGGGGCCGGGTGGCGTCGTCGGCCAG
GTGCCTCCGTACGCCCGTCAGCAGTCGGCGGGAGGAGGCAAACCCGGCGT
CCTCAACACCCAGCAGCAGTTCCAGCAGCAGCAACAGCAACAACAGCAGC
TGAGGCACCAAATGATGCAGTTGCAGGGCATGGGTGGTGGGGCAGGCGGC
GGCATGGGAGCCGGGCCTCAGCAGGGGGGTGGCGCCGTTGGCGGTGGCGC
CGGAGGCGGAATGGTGCCGCAGCAGCAGAGCATGAACCAGCAACAAACGC
CGAATCTGGTGGCTCAGCTCCAGCGGCAGAACATGATGGGCCAGCAGCAG
TATCAACCTCCACCGTACTAGAAGCTTTCTAGACCAT
BS33531.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-04-29 20:18:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kto-RB | 1605 | CG8491-PB | 1..1605 | 17..1621 | 7980 | 99.8 | Plus |
| kto-RA | 7596 | CG8491-PA | 5992..7596 | 17..1621 | 7980 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kto-RB | 1723 | CG8491-RB | 37..1642 | 17..1622 | 7985 | 99.8 | Plus |
| kto-RA | 7740 | CG8491-RA | 6054..7659 | 17..1622 | 7985 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19843565..19844863 | 324..1622 | 6465 | 99.8 | Plus |
| 3L | 28110227 | 3L | 19843194..19843500 | 17..323 | 1520 | 99.7 | Plus |
Blast to na_te.dros performed 2015-04-29 20:18:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2447..3039 | 76..664 | 290 | 54.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6511..6913 | 234..640 | 266 | 57.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2656 | 262..639 | 264 | 58.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..7002 | 363..639 | 230 | 57.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2310..2529 | 965..1187 | 223 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6788..7121 | 862..1190 | 218 | 57.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2265..2539 | 310..609 | 208 | 57.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2334..2473 | 865..1008 | 205 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6721..7092 | 1051..1413 | 203 | 57.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6746..6923 | 449..638 | 201 | 62.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2356..2484 | 1053..1184 | 184 | 65.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2291..2424 | 1045..1187 | 179 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6756..6890 | 1053..1187 | 178 | 63.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2636..2825 | 448..640 | 174 | 56 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2918 | 233..759 | 173 | 53.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2358..2809 | 233..659 | 172 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6737..6922 | 233..421 | 171 | 58.9 | Plus |
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3192..3322 | 1056..1185 | 164 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2521 | 233..420 | 162 | 58.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..7183 | 233..657 | 162 | 55.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6779..6924 | 233..381 | 160 | 60 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6839 | 1062..1187 | 156 | 64.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6889 | 260..421 | 154 | 61.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6800..6914 | 233..344 | 153 | 61.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6899 | 1053..1187 | 152 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2269..2409 | 1052..1187 | 151 | 63.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2274..2460 | 1000..1187 | 151 | 60.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6812..6907 | 233..322 | 150 | 66.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2587..2677 | 918..1008 | 149 | 62.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2768 | 232..694 | 147 | 53.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1556..1587 | 1156..1187 | 142 | 93.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6707..7038 | 68..414 | 141 | 55.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6736..6785 | 1139..1187 | 139 | 78 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6757..6806 | 1139..1187 | 139 | 78 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1142 | 1106..1187 | 139 | 67.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2325..2408 | 1157..1239 | 138 | 64.3 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 6043..6112 | 431..498 | 138 | 68.6 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 7498..7567 | 431..498 | 138 | 68.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6734..6764 | 1157..1187 | 137 | 93.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6717..6770 | 1135..1187 | 132 | 74.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1426..1566 | 1046..1187 | 130 | 60.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1084..1163 | 1105..1184 | 129 | 67.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2355..2385 | 1157..1187 | 128 | 90.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6761..6791 | 1157..1187 | 128 | 90.3 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1060..1091 | 1156..1187 | 124 | 87.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6749 | 1158..1187 | 123 | 90 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1551..1581 | 1157..1187 | 119 | 87.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2322..2352 | 1157..1187 | 119 | 87.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2349..2379 | 1157..1187 | 119 | 87.1 | Plus |
| TART-A | 13424 | TART-A 13424bp | 118..148 | 1156..1186 | 119 | 87.1 | Plus |
| TART-A | 13424 | TART-A 13424bp | 11296..11326 | 1156..1186 | 119 | 87.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1532..1599 | 226..294 | 117 | 65.2 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1095..1187 | 234..323 | 114 | 62.4 | Plus |
| BS | 5142 | BS BS 5142bp | 2045..2074 | 1157..1186 | 114 | 86.7 | Plus |
BS33531.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:19:00 Download gff for
BS33531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kto-RB | 37..1641 | 17..1621 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-29 20:19:00 Download gff for
BS33531.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19843194..19843500 | 17..323 | 99 | -> | Plus |
| 3L | 19843565..19844862 | 324..1621 | 99 | | Plus |
BS33531.pep Sequence
Translation from 16 to 1620
> BS33531.pep
MNMQQFAPNPNNMMQQNAMLQQQQQQQMQQMGNNPMQQQLNVGGGNGQPN
PQMNFMQQGPGGGGAGPQGMPGQQQQWHNAPQQQQPPQPYHNQYAPHQQN
MQSNRIERPPLNANSKQALSQMLRQRQPFQQQAQQGPGGGFNPMQQQPQA
SQQQPGPQQQMNPNQMRQQQMNPQQNPQSVAAFNAMQQQPQQNAQQQQMN
PNQQQQQQFMRGGNMRPGMAPNQMNQMNMGGQGMSQNPMMQQQIPQNMVG
MVNPNANQMMQSGGAQGGNGVGVGVGVGVGGAGNNPNMGMGGMPQQGMIQ
QQPQQQPQQQVQFQNFQNQYQQQQQQGMQQQGGGAGVGVGVGMAPNQQQQ
QQANMMGNFNPQMQQGNRNNPDFMAAAAVAQQQQQQQQQQRVVPGGMMAG
NRNQYMNQAPNVTMSTMMGPGPGGVVGQVPPYARQQSAGGGKPGVLNTQQ
QFQQQQQQQQQLRHQMMQLQGMGGGAGGGMGAGPQQGGGAVGGGAGGGMV
PQQQSMNQQQTPNLVAQLQRQNMMGQQQYQPPPY*
BS33531.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-04-29 20:19:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kto-PB | 534 | CG8491-PB | 1..534 | 1..534 | 2873 | 100 | Plus |
| kto-PA | 2531 | CG8491-PA | 1998..2531 | 1..534 | 2873 | 100 | Plus |
| mam-PD | 1594 | CG8118-PD | 634..1215 | 3..534 | 470 | 32.5 | Plus |
| mam-PB | 1594 | CG8118-PB | 634..1215 | 3..534 | 470 | 32.5 | Plus |
| mam-PA | 1594 | CG8118-PA | 634..1215 | 3..534 | 470 | 32.5 | Plus |
| mam-PD | 1594 | CG8118-PD | 638..1279 | 8..531 | 437 | 30.7 | Plus |
| mam-PB | 1594 | CG8118-PB | 638..1279 | 8..531 | 437 | 30.7 | Plus |
| mam-PD | 1594 | CG8118-PD | 603..1130 | 9..512 | 393 | 29.8 | Plus |
| mam-PB | 1594 | CG8118-PB | 603..1130 | 9..512 | 393 | 29.8 | Plus |
| mam-PD | 1594 | CG8118-PD | 783..1431 | 8..530 | 379 | 30 | Plus |
| mam-PB | 1594 | CG8118-PB | 783..1431 | 8..530 | 379 | 30 | Plus |
| mam-PD | 1594 | CG8118-PD | 951..1532 | 15..498 | 375 | 29.4 | Plus |
| mam-PB | 1594 | CG8118-PB | 951..1532 | 15..498 | 375 | 29.4 | Plus |
| mam-PD | 1594 | CG8118-PD | 738..1295 | 4..529 | 366 | 29.3 | Plus |
| mam-PB | 1594 | CG8118-PB | 738..1295 | 4..529 | 366 | 29.3 | Plus |
| mam-PD | 1594 | CG8118-PD | 567..1050 | 193..531 | 225 | 28.6 | Plus |
| mam-PB | 1594 | CG8118-PB | 567..1050 | 193..531 | 225 | 28.6 | Plus |
| mam-PD | 1594 | CG8118-PD | 52..673 | 1..528 | 209 | 24 | Plus |
| mam-PB | 1594 | CG8118-PB | 52..673 | 1..528 | 209 | 24 | Plus |
| mam-PD | 1594 | CG8118-PD | 308..819 | 2..531 | 181 | 22.9 | Plus |
| mam-PB | 1594 | CG8118-PB | 308..819 | 2..531 | 181 | 22.9 | Plus |
| mam-PD | 1594 | CG8118-PD | 21..484 | 21..483 | 177 | 23 | Plus |
| mam-PB | 1594 | CG8118-PB | 21..484 | 21..483 | 177 | 23 | Plus |
