BS33533.complete Sequence
1562 bp assembled on 2015-04-29
GenBank Submission: KX804143
> BS33533.complete
GAAGTTATCAGTCGACATGATATACAGCACATCTGTGATGAGCATGATGA
AACTTTTGGAAATGGAAGAATCTCTAAAAACGAACTTAGATATATACGTT
CAGGAAATGCAGTCCAAGTTAGATCTGATTAAATTATATCAAGACTCGCT
GAAACGAGTAACTTTAACAACGCTGGAGGAGAAGGAAGAGTATGTGTCCA
ATCCTCTAAATGCGTTTCCCATGCTCAGACGCCTCAATCAAGATTGGCCC
AAATGGCTGAGATATATAAAATTGGCTATAGCTTCGAAGAAAATCAAAGA
AATGGAAGTGCAGTTGAAGTCCGCGCCGATTGACGATGACCTCAAAGTTG
CCCTAAAGGGTATGACGCGCATTGAAAAATTTCACAATCTGCACGCAGAG
GATTTGACGAAAGGTGTCCTCATGGGAAAGAAATTAAACTCCCATTTGAC
TGCTCCGGATTGTGTTGCCCTGGGTGATTATTACTACAATCAAACTCAAT
TCTCAGGATCCACGCACTGGTATCGCATGGCCCTAAGGGTTCACACACAT
CCTCGTGGCATGATCTACGCGAAAGTTTTGGGCTTGAAAAGGAAAAGGAT
ATACAAGAAGTATGCCAAGGCCTTGCTGAAAGAATCCCTAAATTCGGATA
AAAGTAAGCCCACTCCGACAGAGAAGTCTGAATGGAACCGATTGGCCAAA
GAGGTCACACGGGAAGACAACTACGACAACGTTAAAAAGTTAATTGATGA
ATACCTATCAGGGGACGAGAAGATCTTCCAAGAGGTAGCAGCCCGACTGA
AGCGCAAACCAACCAAGCTGGAGCGAGGTTGCCGTGGAGAGTGGCCAAAG
AAATCCTCGCCAGAACTAATATGTCGCTATAATAGGGACACCTCTGCGTT
CCTTAAGTTAGCTCCACTTAAGTTGGAGTTTCTGAGCGTGCAGCCAATGA
TACTTCTGTATCACGACGTGCTGTATGAAAACGAATTCAAATCAATGCGA
GACATAGCCATGTATAATGGCTCCATGATTGATGGCTGGACATATGTAGA
CTTTGACAAAAAGGGCAATCCAAAGCAACAGGACCGAGTGGTGAAAATGA
TTGCTTTTCAGGGCACCACAGCACCTTTCACTTTGAGCATCAATCGGCGG
ATGGCGGATATGAGTGGTCTTGAGATGCGCGATAACATGGTCCTGTACCT
GACCAATTACGGACTGGGTGGTCATTTTGGAAAGCATGTTGACTACGTGG
AGTTGGCCAAAAGACCTCCAGACTTTTTTGCTGATTTCGGAGGCGATCGC
ATAGCTACAGCGTTAATCTACGCATCTGACATTCCTTTGGGGGGAACTAC
AGTTTTCACAAAACTTAAGATTGCCGTGCAGCCCAAAAAAGGCAGTGCAT
TGATTTGGTTCAACTTGAATCACGCCGGAGAGCCTGATCCGCTAACAGAA
CATTCCGTTTGTCCTGTCGTCCTGGGCTCCAGATGGATAATATCGAAATG
GATCCACGAACGCCAGCAAGTATTCAAGAAGCCTTGTTTAGCCTAAAAGC
TTTCTAGACCAT
BS33533.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-04-29 20:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32199-RB | 1530 | CG32199-PB | 1..1530 | 17..1546 | 7635 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:18:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32199-RB | 1692 | CG32199-RB | 79..1608 | 17..1546 | 7635 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-04-29 20:18:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 18612831..18613462 | 636..1267 | 3145 | 99.8 | Plus |
| 3L | 28110227 | 3L | 18612206..18612508 | 136..438 | 1515 | 100 | Plus |
| 3L | 28110227 | 3L | 18612567..18612763 | 439..635 | 985 | 100 | Plus |
| 3L | 28110227 | 3L | 18613620..18613801 | 1306..1487 | 850 | 97.8 | Plus |
| 3L | 28110227 | 3L | 18611978..18612096 | 17..135 | 595 | 100 | Plus |
| 3L | 28110227 | 3L | 18613862..18613920 | 1488..1546 | 295 | 100 | Plus |
| 3L | 28110227 | 3L | 18613522..18613576 | 1268..1322 | 275 | 100 | Plus |
Blast to na_te.dros performed on 2015-04-29 20:18:41 has no hits.
BS33533.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-04-29 20:19:01 Download gff for
BS33533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32199-RB | 79..1606 | 17..1544 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-04-29 20:19:01 Download gff for
BS33533.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 18613636..18613801 | 1322..1487 | 100 | -> | Plus |
| 3L | 18613862..18613918 | 1488..1544 | 100 | | Plus |
| 3L | 18611978..18612096 | 17..135 | 100 | -> | Plus |
| 3L | 18612206..18612508 | 136..438 | 100 | -> | Plus |
| 3L | 18612567..18612763 | 439..635 | 100 | -> | Plus |
| 3L | 18612831..18613462 | 636..1267 | 99 | -> | Plus |
| 3L | 18613522..18613575 | 1268..1321 | 100 | -> | Plus |
BS33533.pep Sequence
Translation from 16 to 1545
> BS33533.pep
MIYSTSVMSMMKLLEMEESLKTNLDIYVQEMQSKLDLIKLYQDSLKRVTL
TTLEEKEEYVSNPLNAFPMLRRLNQDWPKWLRYIKLAIASKKIKEMEVQL
KSAPIDDDLKVALKGMTRIEKFHNLHAEDLTKGVLMGKKLNSHLTAPDCV
ALGDYYYNQTQFSGSTHWYRMALRVHTHPRGMIYAKVLGLKRKRIYKKYA
KALLKESLNSDKSKPTPTEKSEWNRLAKEVTREDNYDNVKKLIDEYLSGD
EKIFQEVAARLKRKPTKLERGCRGEWPKKSSPELICRYNRDTSAFLKLAP
LKLEFLSVQPMILLYHDVLYENEFKSMRDIAMYNGSMIDGWTYVDFDKKG
NPKQQDRVVKMIAFQGTTAPFTLSINRRMADMSGLEMRDNMVLYLTNYGL
GGHFGKHVDYVELAKRPPDFFADFGGDRIATALIYASDIPLGGTTVFTKL
KIAVQPKKGSALIWFNLNHAGEPDPLTEHSVCPVVLGSRWIISKWIHERQ
QVFKKPCLA*
BS33533.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-04-29 20:19:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32199-PB | 509 | CG32199-PB | 1..509 | 1..509 | 2669 | 100 | Plus |
| CG34345-PA | 504 | CG34345-PA | 35..502 | 1..507 | 856 | 36.6 | Plus |
| CG18233-PB | 515 | CG18233-PB | 31..508 | 3..507 | 814 | 35.6 | Plus |
| CG32201-PB | 520 | CG32201-PB | 33..518 | 3..507 | 800 | 34.9 | Plus |
| PH4alphaPV-PA | 525 | CG31015-PA | 32..521 | 3..508 | 742 | 31.9 | Plus |
