BS33539.complete Sequence
1328 bp assembled on 2015-03-10
GenBank Submission: KX805011
> BS33539.complete
GAAGTTATCAGTCGACATGACCAACCGCCTGGAGACCAAATACGAGAACC
TGAGCAGCATTTTCCGGCTAAAGGGACATGACTACCAAAAGCAGTTCTTC
CATCTGTATGCCCACCGCCTGGCCGAGATGACGCGTCTCCTAACGCCGCT
GGCCCAGAAGAAGTGGGGCAACAAGGAGCCCATCAAAAAACTGTGTGAGC
TGCGGGGTGAACAGGACGTGCACTGCATCCTGATCGGCACCATTTTTAAG
CACCAGGCTCACAAGCCCAGTATCCTCCGGGACATTTCTGAGGAGAATCA
GTTAGCGCCACAGCCGCCAAGACAGAACTACTCGGATCCGGAGGACAAGA
TTGTTCTGGAGGATGAACTGCAGCGGGTTCGACTTCAGGGCAAGCTAAAT
GGACAGCTCTTAGCCACTGGAGTTGTGTGCGCTGCCCTCGGTGGAACAGA
CAGTGACGGATTTTTTAACGTGGAGGATATACTCTTCTACGAAAGTGGAC
CTCAAAAGCCACTGGCCCCCATTAAAAGAAGCCGCCTCCTGGTGCTGGCG
TCTGGGTTGGACCAACTGCAGGCCCACAAATTTGTGGAGGCATTGAATCT
CTTTCAGTACTGGCTGGCCGGCAGTCTTGGAAACAACAAGGAAGCGGGCT
CCATGGTGCGTCTTATCGTGGCTGGAAATTCGGTGAGAGCCAGTGCCATG
GCACATGTGCCCACCCTACAGGTGGCACGCACCCAGGCGAACGCAAATGA
CACAGTCCAGGCCGTTTCCCAGCTAGACCAGTGGTTTGCCTCATGGGCAC
GCAGTCTGCCCGTCGACATAATGCCGGGACCCTACGACCCGGCCAACTTT
ATGCTGCCCCAGCAGCCGTTCCACAAGTGCATGTTTCCCCAGGCTGCTCA
ACTGGCAACTTTCCAGGCGGTGACTAATCCGTACAGCTGCCGGCTGGATG
AGGCCCTGGTGGTAGGCACATCTGGCCAGAATGTATCGGATCTGTTGCGC
AGCACTTCGCTGGACTCGGCGCTGGAGGCCCTTCGCTGCACCCTCACCTG
GGGACATGTTGCTCCCACTGCACCGGACACTCTAGCCTGCTACCCGTACA
TCGAAAGTGATCCCTTCATCCTGCGCGAGTGTCCGCACGTTTACTACGCC
GGCAACTGCGAGTCGTTTGCGACCGAGCTGCACGAGGGTTCCGAAGGCAA
GCGCACCCGCCTAGTCTGCGTGCCCAGTTTTAGCAAAACGCAGAGTGTGG
CCGTCGTGGACCTGGATACGCTGGATTGCCGCATGGTCAACTTTAGCGTA
GATGCAGAATAAAAGCTTTCTAGACCAT
BS33539.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12018-RA | 1296 | CG12018-PA | 1..1296 | 17..1312 | 6405 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12018-RA | 1387 | CG12018-RA | 48..1344 | 16..1312 | 6410 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1775680..1776976 | 16..1312 | 6410 | 99.6 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:08 has no hits.
BS33539.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:17 Download gff for
BS33539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12018-RA | 49..1342 | 17..1310 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:17 Download gff for
BS33539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1775681..1776974 | 17..1310 | 99 | | Plus |
BS33539.pep Sequence
Translation from 16 to 1311
> BS33539.pep
MTNRLETKYENLSSIFRLKGHDYQKQFFHLYAHRLAEMTRLLTPLAQKKW
GNKEPIKKLCELRGEQDVHCILIGTIFKHQAHKPSILRDISEENQLAPQP
PRQNYSDPEDKIVLEDELQRVRLQGKLNGQLLATGVVCAALGGTDSDGFF
NVEDILFYESGPQKPLAPIKRSRLLVLASGLDQLQAHKFVEALNLFQYWL
AGSLGNNKEAGSMVRLIVAGNSVRASAMAHVPTLQVARTQANANDTVQAV
SQLDQWFASWARSLPVDIMPGPYDPANFMLPQQPFHKCMFPQAAQLATFQ
AVTNPYSCRLDEALVVGTSGQNVSDLLRSTSLDSALEALRCTLTWGHVAP
TAPDTLACYPYIESDPFILRECPHVYYAGNCESFATELHEGSEGKRTRLV
CVPSFSKTQSVAVVDLDTLDCRMVNFSVDAE*
BS33539.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12018-PA | 431 | CG12018-PA | 1..431 | 1..431 | 2259 | 100 | Plus |
