BS33541.complete Sequence
1235 bp assembled on 2015-03-10
GenBank Submission: KX804739
> BS33541.complete
GAAGTTATCAGTCGACATGAAAGTTCCGAAAATTCCCGATTGGGTTTCCT
CTCTATCCTTGAACCAGGCCGTCCATTCCGTCCTGGAAGATGGGGTGCAG
ATTACTTCCGTCATCCCAAGCGTTCATCTTATCCAGTTTCGCAACTGCAC
TGTGCTCCTGCCAATCCAGGTGAAAGTCCAACTGCGGGACTTCACGATGA
AGAAATTGTTCTTTCTACTGAAGGCACAACATGGCACCGACATTCAGGCC
ATGGTGATGAACCAGTTGAAGATGTTCCAACGGGAACACCAGGTTTACCA
CAATGTCCTGCCCAAGCTCGAGGAAATCTACAGAGAGGTGGGCAAGAAGG
TATCCTTTGGTCCAAGGGCCTTTAGGCTGGACTACAGCATCGGTGTTCAG
TATGTCCTGTTGGAGGATCTCAAGGCCAAGTCCTACAAAAACGTTGAACG
GCAGGCTGGCTTCAACAAATTGTGCCTGAAGCAGGTGCTCAAGAAACTGG
CCCAGTTCCATGCCGCCTCCGCCGTGTGTGTGGAAAAGCATGGCGCGTTT
AGCAATCTTCTGGTCAACGGAGTCTACACAAAGGCAAACGAATCTGTGCT
CCAGGAGCTGAACGATCCGGAGATCTTCCTTTCCCAGTTGCGACGCTGGC
GTTTGGGCGATCATTTCCACAAACGGTTGGTGGAAAAGGAGAAGGACCTC
GTCGATGGGCTGTTAAAGCTTCATTCTCCCGACTCCAATGAATTTAACGT
CCTGAATCACAGCGACTGCTGGGTGAACAACGTTATGTTCAAGTTCGACG
ACTCCGGCCATGTGGAGGACACCGCACTGCTCGATTACCAGTTGGTCAAA
TATGGATCTCCTGCCATTGATTTGTACTACACCATTTTGTCGTCCGCTGA
AAAGGACATAAAACTAGCCCAGTTTGACAATATGGTTCAGTATTACTTCT
ACCATTTGCTGGATAACCTCAAAGCTCTTAATTTCGGAGGCAGTCTACCG
CAGTTGCAGCATATTCGCGATGCCCTAAACAAAAACGGGCTGGCTGCCTA
TGTGGTGGTCACTCGGGCCCTGCCCATTACGATGATGAATCAGTTCGAGG
ACGAGGTAAACGAACGATATGCCTCCAAAATGAAGTGCGCCATGTTCACC
AGCCGGAAATACATCCAGGCGATTAAGGATATCCTGCCCTGGATGGAGGA
GCGATCCCTGCTTAATTAGAAGCTTTCTAGACCAT
BS33541.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31099-RA | 1203 | CG31099-PA | 1..1203 | 17..1219 | 5880 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31099-RA | 1401 | CG31099-RA | 91..1294 | 16..1219 | 5885 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25310006..25310853 | 863..16 | 4165 | 99.4 | Minus |
| 3R | 32079331 | 3R | 25309762..25309945 | 1046..863 | 905 | 99.5 | Minus |
| 3R | 32079331 | 3R | 25309536..25309709 | 1219..1046 | 825 | 98.3 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:08:10 has no hits.
BS33541.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:19 Download gff for
BS33541.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31099-RA | 92..1294 | 17..1219 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:19 Download gff for
BS33541.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25309536..25309708 | 1047..1219 | 98 | <- | Minus |
| 3R | 25309762..25309945 | 863..1046 | 99 | <- | Minus |
| 3R | 25310007..25310852 | 17..862 | 99 | | Minus |
BS33541.pep Sequence
Translation from 16 to 1218
> BS33541.pep
MKVPKIPDWVSSLSLNQAVHSVLEDGVQITSVIPSVHLIQFRNCTVLLPI
QVKVQLRDFTMKKLFFLLKAQHGTDIQAMVMNQLKMFQREHQVYHNVLPK
LEEIYREVGKKVSFGPRAFRLDYSIGVQYVLLEDLKAKSYKNVERQAGFN
KLCLKQVLKKLAQFHAASAVCVEKHGAFSNLLVNGVYTKANESVLQELND
PEIFLSQLRRWRLGDHFHKRLVEKEKDLVDGLLKLHSPDSNEFNVLNHSD
CWVNNVMFKFDDSGHVEDTALLDYQLVKYGSPAIDLYYTILSSAEKDIKL
AQFDNMVQYYFYHLLDNLKALNFGGSLPQLQHIRDALNKNGLAAYVVVTR
ALPITMMNQFEDEVNERYASKMKCAMFTSRKYIQAIKDILPWMEERSLLN
*
BS33541.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31099-PA | 400 | CG31099-PA | 1..400 | 1..400 | 2070 | 100 | Plus |
| CG31087-PB | 417 | CG31087-PB | 17..415 | 6..400 | 923 | 44.9 | Plus |
| CG31087-PA | 417 | CG31087-PA | 17..415 | 6..400 | 923 | 44.9 | Plus |
| CG6830-PA | 891 | CG6830-PA | 481..883 | 5..400 | 584 | 31.4 | Plus |
| CHKov1-PE | 410 | CG10618-PE | 1..408 | 1..400 | 568 | 29.8 | Plus |
