BS33542.complete Sequence
878 bp assembled on 2015-03-10
GenBank Submission: KX800663
> BS33542.complete
GAAGTTATCAGTCGACATGTTAAGTGTAACCAGATCGGCATCAGCCCCAA
ATTTCAGCGTGCGATCCGTTGTAACCTATAGCTCCACGAGCCACTTCGAG
GCAAATCATAGTGTGAGTGATAGTCCGTTCTCGGAAGTGGATCGTTTTGT
GGAGGCTGCCACCAGCATCAACCGTTTTCCAAAGAGGCGGAAACTCTCCT
CCTGCATTTTCCGAACCTACGTCTGCCTGCTGTTGGTCATCCAGGTCATC
CTGGCATCGCTGCAGTGGCTCGGATCCACGTACCGCTGGAAACCGCAGCT
AAGTGCGGCCAACCGCGGCCTGTCCGTCCTGCTGCTCCTGATTTCGTGGA
TCAACCTGACGCTGGCCTTCATGGGCTTCCGACGGCTGCAGTTCACCTTC
CCGCTCAATTGGATTGTCTTTGGGTGCATCTTCGAGAGCCTCACGCTGCT
GGTGGTATGTCTGCACATTCTGGAACAGGACCTAACGTGGCCGTTTGTGC
TAATTGGCATTGGCGTGCTGGTTGTCTATACGCTGCTGGGGCTGTGGGTA
CCTGGATTCCTCACCGCCAACTTGTGGATCCTAATCCTGGCAAGCATTGT
GGTCTTCCTGGTCTCGACAGTGGCCTTGAGCGTCCGCCTGCAGATGCGAT
ACTACGTGCCCGCTAGCGTCTGTTTGGTTTTCTTCGGACCCTGGACCATG
TACAACTCCCAGAAGCTGTTCCTGCACCACAAGCGGTCTGGTTACGTAGC
TCACCAGTACTTGGAGGCGTCCGCCAAGATGTTCATCAATTATGCCTTCA
CTGTGAGTGGCATTATATTTGCCCACCGCTTCTCGGTGGACACATTGGAT
GCCCACAGTTAGAAGCTTTCTAGACCAT
BS33542.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16825-RB | 846 | CG16825-PB | 1..846 | 17..862 | 4125 | 99.2 | Plus |
| CG16825-RA | 846 | CG16825-PA | 1..846 | 17..862 | 4125 | 99.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16825-RB | 3020 | CG16825-RB | 2054..2899 | 17..862 | 4125 | 99.2 | Plus |
| CG16825-RA | 1888 | CG16825-RA | 922..1767 | 17..862 | 4125 | 99.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13306841..13307686 | 17..862 | 4125 | 99.2 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:12 has no hits.
BS33542.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:21 Download gff for
BS33542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16825-RB | 2059..2899 | 22..862 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:21 Download gff for
BS33542.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13306846..13307686 | 22..862 | 99 | | Plus |
BS33542.pep Sequence
Translation from 16 to 861
> BS33542.pep
MLSVTRSASAPNFSVRSVVTYSSTSHFEANHSVSDSPFSEVDRFVEAATS
INRFPKRRKLSSCIFRTYVCLLLVIQVILASLQWLGSTYRWKPQLSAANR
GLSVLLLLISWINLTLAFMGFRRLQFTFPLNWIVFGCIFESLTLLVVCLH
ILEQDLTWPFVLIGIGVLVVYTLLGLWVPGFLTANLWILILASIVVFLVS
TVALSVRLQMRYYVPASVCLVFFGPWTMYNSQKLFLHHKRSGYVAHQYLE
ASAKMFINYAFTVSGIIFAHRFSVDTLDAHS*
BS33542.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG16825-PB | 281 | CG16825-PB | 1..281 | 1..281 | 1444 | 100 | Plus |
| CG16825-PA | 281 | CG16825-PA | 1..281 | 1..281 | 1444 | 100 | Plus |
