BS33544.complete Sequence
929 bp assembled on 2015-03-10
GenBank Submission: KX800965
> BS33544.complete
GAAGTTATCAGTCGACATGTTCGATACAACTAAATACTTTCCGCGTTCAG
TTGATTCCGAGCATCCGTCCCAGTCGGAGCACAATGAGTCCTTGTCACTG
GATCATGTCGTCACCTACGATATGGTCCATAACCCGGAGGGAAGATCACC
TGATCACAGTGTCATCGAAATGACATCGGAAGCTGACCGGCATATAGGAC
ACGATGTCACTTCATCTCCCCAATTGATGATTATATTTGAAGAAGGCGAC
ATCAACAGTGCACTGCACTTTATTATTGAGTCGGTTCATAATCCTTTTGC
CTCGAATGCGGTGGCCATGGTTCTGGTTGAAGAGAAAATTCGCGGGGAGA
TCGTCGAGCGAATCCTGTCTAAGCTACATCCTCTTAGTAAGTTTGTGGCC
GAACATCCTAGCTATCTGGCAGCACTGGAGAAATGCCACACCTCCAACTT
TAACATAATAAGGGCCTGCATTTCGGAGGTTGCCCCACCAATGGCTTCAC
CCATTTTTGTGTGTGACTGTACGCACGATAAGCTGGGAAGTTACCCAACT
GGAGTAGTAACATTTCACACATTCCGCAATAACCAGGAGGCCATTGCCAT
AAGTCAGTGCGAATCGTTGGCCTTCGCATCCGTCTCCATTTGGAACGAAA
CGCTAACTGGATGCTACGATCTCGTGGCGGCCCTCAGCTCGTCCTATTTT
TTTCTAAACTGCGCCAACGTTGACTTGTCGCCAATTTTAAAGCCACACAA
GGCCCAGAAAAATTACGTGGTAGTTGAAAACGGCTTTCACTTCGAAACCC
TACGTATCTATGACAATTTCAAAGCCATTGTATTTCCCATTGGCGGACAA
ATATTGCCAGACATCGAGGATCACAAGGAGGAGCACGCAGCTATCTTCTT
TTTGGAAGCTTAGAAGCTTTCTAGACCAT
BS33544.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11634-RB | 897 | CG11634-PB | 1..897 | 17..913 | 4470 | 99.9 | Plus |
| CG11634-RA | 897 | CG11634-PA | 1..897 | 17..913 | 4470 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11634-RB | 1926 | CG11634-RB | 105..1002 | 16..913 | 4475 | 99.9 | Plus |
| CG11634-RA | 1151 | CG11634-RA | 105..1002 | 16..913 | 4475 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21916404..21917301 | 16..913 | 4475 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:17 has no hits.
BS33544.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:23 Download gff for
BS33544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11634-RB | 111..1002 | 22..913 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:23 Download gff for
BS33544.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21916410..21917301 | 22..913 | 99 | | Plus |
BS33544.pep Sequence
Translation from 16 to 912
> BS33544.pep
MFDTTKYFPRSVDSEHPSQSEHNESLSLDHVVTYDMVHNPEGRSPDHSVI
EMTSEADRHIGHDVTSSPQLMIIFEEGDINSALHFIIESVHNPFASNAVA
MVLVEEKIRGEIVERILSKLHPLSKFVAEHPSYLAALEKCHTSNFNIIRA
CISEVAPPMASPIFVCDCTHDKLGSYPTGVVTFHTFRNNQEAIAISQCES
LAFASVSIWNETLTGCYDLVAALSSSYFFLNCANVDLSPILKPHKAQKNY
VVVENGFHFETLRIYDNFKAIVFPIGGQILPDIEDHKEEHAAIFFLEA*
BS33544.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11634-PB | 298 | CG11634-PB | 1..298 | 1..298 | 1565 | 100 | Plus |
| CG11634-PA | 298 | CG11634-PA | 1..298 | 1..298 | 1565 | 100 | Plus |
| CG2336-PA | 322 | CG2336-PA | 99..308 | 66..276 | 435 | 42.9 | Plus |
| CG15717-PE | 252 | CG15717-PE | 41..247 | 67..276 | 413 | 39 | Plus |
| CG15717-PC | 252 | CG15717-PC | 41..247 | 67..276 | 413 | 39 | Plus |
