BS33546.complete Sequence
746 bp assembled on 2015-03-10
GenBank Submission: KX800155
> BS33546.complete
GAAGTTATCAGTCGACATGACGGCCACACAAAAACTCCGAACATCGACGA
TGGAGTGGTGCGATCGAAACTCGAGACCCAAGTCATCGATACCCAATCCC
GCCGTTCGTCCGGAACCTACTAGATGGCAAAAGCCAGGACCGATGAGCCG
GAATGAGTGGGCCAACTTCCACAAAACTTACCAAGTAGATACAATGGCCT
ATAACCAAAGATTGCAGGGTGGAAAGCAAAAGCGAGATAGCAAACCCATT
GTTGAGAAGCCTTCCTTGCCAGAAGTTAGTCCTCTAACGGAAAACCAATA
TCGTCTGAGTATGCCACGCTGGCAGCGCCAAAAGTATATCCCACCGCCAC
CGGAACAGTTTCCCTATCGACCACAAATCATCGGCCAAAGTGCTCCTCCA
CGTCCGGAACATGGTAGACCAGTTCAAAGGCCAGTGGTTCCGTGCTGCTT
TCAGCACGTGGATCTCGAGAACGAGTTTTGGTCTAACTTGCGGTTTCCTG
TGTCGCGGAAAGCACTCACAGCCCGTCCCAGTAAGAAGATCTATGAACTG
GCCCGGCCACGACAATATCCACAGAAATCCCACTGCCCGGTGCCCAGCAG
CAACGAGGGGGAGGTGCCCAGACTTCGGAAAATGACCCCGCGGGAGTGGC
GACATCATCTGCAGCGACTAGAGTTCCTAGCAAAACCAAATCCTCGGGTT
TTGGCCGATTTACTGTGCTGCTGTCACTAAAAGCTTTCTAGACCAT
BS33546.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:07:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31245-RA | 714 | CG31245-PA | 1..714 | 17..730 | 3540 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:07:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31245-RA | 965 | CG31245-RA | 178..892 | 17..731 | 3545 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19376268..19376761 | 731..238 | 2455 | 99.8 | Minus |
| 3R | 32079331 | 3R | 19376825..19377048 | 240..17 | 1105 | 99.6 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:07:58 has no hits.
BS33546.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:11 Download gff for
BS33546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31245-RA | 178..889 | 17..728 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:11 Download gff for
BS33546.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19376825..19377048 | 17..240 | 99 | | Minus |
| 3R | 19376271..19376758 | 241..728 | 99 | <- | Minus |
BS33546.pep Sequence
Translation from 16 to 729
> BS33546.pep
MTATQKLRTSTMEWCDRNSRPKSSIPNPAVRPEPTRWQKPGPMSRNEWAN
FHKTYQVDTMAYNQRLQGGKQKRDSKPIVEKPSLPEVSPLTENQYRLSMP
RWQRQKYIPPPPEQFPYRPQIIGQSAPPRPEHGRPVQRPVVPCCFQHVDL
ENEFWSNLRFPVSRKALTARPSKKIYELARPRQYPQKSHCPVPSSNEGEV
PRLRKMTPREWRHHLQRLEFLAKPNPRVLADLLCCCH*
BS33546.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31245-PA | 237 | CG31245-PA | 1..237 | 1..237 | 1319 | 100 | Plus |
| CG31404-PA | 274 | CG31404-PA | 51..268 | 14..227 | 295 | 36 | Plus |
| CG3581-PA | 253 | CG3581-PA | 21..245 | 10..227 | 279 | 33.5 | Plus |
