BS33547.complete Sequence
773 bp assembled on 2015-03-10
GenBank Submission: KX800158
> BS33547.complete
GAAGTTATCAGTCGACATGCCAGTACAGGAAATGTTTGCTATTATGGACA
ACATTTACCATGGATTGCGCCGCTGCTTCGGACCTGAAAATCAGATTGAA
CCCCCAAAGTATCCAGCTTACAATACGTTGAAAAAACTTGGTAAGCGACG
TCGCAGAGTATGTAAAAGCATTCTCGGTTCGAAACATATACGGAGGAATC
ATTTTTCCACCAGCGAAGAAAGCGTCCAAAATTTGAGTGCCTCAGAACTC
AAGGAGTATTTTGCAAGGCCAAAGTTAACAGCTCCCAAGACGGTGAGCCA
TGAGCCCGGCATAAGCCCTTCGATTGACCTGATACATCGTCGGCGACTCC
AAAACCGCCCGCTGATGTTGAATGCCTGGCAGGTTCTTCAAGTTCAGTGG
GGCGGTTGGTGGCAGAGGTGCTGGCCCACTCTAGTGGCAGCCAGTATGCA
GATGAGCTGCGGATCATCGGTCCTTTGCCATTCGCTGTTGGGGCTCTACG
ATGACGAGGAATCAAGTCCACCAATCGTGGTGCTCATGTGTTACTTTGGC
CAGGCGATTAAAAAGCTTTGCAAACACGCTGACTTGGCCATTTGTAGCAA
TGGCCATAGTCCCAATTATGTGACCACATCGGCTGCCATGGAGCTGATTG
ACATTCGCGACTTTTTTCAACATATTAACAATGCCCTGGTAGACTTCCTG
CTCAGAGCCGCCGAATCCGGAATGTATATGGGCGATCAATTGGATTACAA
TAACTGAAAGCTTTCTAGACCAT
BS33547.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31459-RA | 741 | CG31459-PA | 1..741 | 17..757 | 3705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31459-RA | 1014 | CG31459-RA | 152..892 | 17..757 | 3705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19841128..19841492 | 91..455 | 1810 | 99.7 | Plus |
| 3R | 32079331 | 3R | 19841725..19841918 | 564..757 | 970 | 100 | Plus |
| 3R | 32079331 | 3R | 19841551..19841666 | 450..565 | 580 | 100 | Plus |
| 3R | 32079331 | 3R | 19840996..19841069 | 17..90 | 370 | 100 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:00 has no hits.
BS33547.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:12 Download gff for
BS33547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31459-RA | 152..891 | 17..756 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:12 Download gff for
BS33547.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19840996..19841069 | 17..90 | 100 | -> | Plus |
| 3R | 19841128..19841488 | 91..451 | 100 | -> | Plus |
| 3R | 19841553..19841666 | 452..565 | 100 | -> | Plus |
| 3R | 19841727..19841917 | 566..756 | 100 | | Plus |
BS33547.pep Sequence
Translation from 16 to 756
> BS33547.pep
MPVQEMFAIMDNIYHGLRRCFGPENQIEPPKYPAYNTLKKLGKRRRRVCK
SILGSKHIRRNHFSTSEESVQNLSASELKEYFARPKLTAPKTVSHEPGIS
PSIDLIHRRRLQNRPLMLNAWQVLQVQWGGWWQRCWPTLVAASMQMSCGS
SVLCHSLLGLYDDEESSPPIVVLMCYFGQAIKKLCKHADLAICSNGHSPN
YVTTSAAMELIDIRDFFQHINNALVDFLLRAAESGMYMGDQLDYNN*
BS33547.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:06:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31459-PA | 246 | CG31459-PA | 1..246 | 1..246 | 1321 | 100 | Plus |
