BS33550.complete Sequence
1199 bp assembled on 2015-03-10
GenBank Submission: KX800499
> BS33550.complete
GAAGTTATCAGTCGACATGGCATTTCTGGGCAAAGTCAACAGTCAGGGAA
CCCTTATCGACCATGAACTATTCTGCATGACCCAGCCCAGCCAGCAGGAT
TCAGATGGCCAAGCCAGAGAGATGGGGGCTCGTGTACTGCTACCGCGAAG
AAAGGGTTCCAGGACTTTCATCAAGACCTGTGACAAGGACAGCCTCGTGC
GCTCTATGGGTAGCCCCAGCACAGTGCGCTACGTGGGCAGCTCCGAGTCG
TCCAGTGAAGTCAACTCATTGGACGAGACGGAGACCTCCACTCTGCGCTG
CTGCTCGGATTTGTCCCTGGGCACCCTGAAGTCGACCAAGACAATTGAGG
GGCCCCGCGTCGGTGAACTGGGAGAGGATATCGAGCTGCAGACGGAGTCG
GAGACGGTCTGCCTGCATCTGGGCAGTCCCAGCAGTAGCACCAGCACGGA
CCGGAGTAGCTGCAGCAGCCGATCCTGCCCCTCTTCCCGCAGCGGCAACA
ATTCCAGCGACAAGGACTCGACGACCTCGATGTGCAGCTGGGAGGAGGCC
ATGTCCCGGGACGACAGCATGCTGGCCCCGCTCGAGTTGCCACTAAGCCA
CAGCCTGCCCTCGCTGCGCCTGGGATCGAGCGTAGGATCGCCGCCCCTTA
CCTACACCCGCCGCATCGAACCGCTCCATATCCGGCGGTCCGCCGGTGAG
GCCTACGAGAACTGGCTGTCCGGCAAGCAACGCCAGTGCCAGTACAAGTT
GCAGGCGCAGCAGGCCGAGAGAGAGGCGCAGCGGCAGCGAACGGAGCTGA
GGCAGCGGCTCGCCAAGGAGAAGTACGAGCAGTGGTGTCAGCAGAAGGCG
CAGCAGACCACCAGTACCGCCAAGCTCACCAAGCCCGACCGTTCTGCCCA
GCTGCCGCCGCAAAAGAATATGGCGTCTGTGCAACATCACCTGCAGGAGT
GGGAGCTGCACAAGCTTAGGCTGCTCGAACAGCGTCGCCTCGAGCAGCGG
AATGCCGAGCGGCGGCGCCAGGAGGAGAAGGCCGCCCGCCGCTCGCAGGC
GGAAGAGGCCTTCAGTCGGTGGATGAGCAACGTGGCCCAGAGGCCCAAGC
CCGTCCCCTCCAGCCAGGGAATGAAGTCGCTGCGCGGCACCGTTTCCGAC
ATCTTTATAAACCCCAAGCAGTGGGTGAATTAAAAGCTTTCTAGACCAT
BS33550.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14011-RC | 1167 | CG14011-PC | 1..1167 | 17..1183 | 5835 | 100 | Plus |
| CG14011-RB | 1167 | CG14011-PB | 1..1167 | 17..1183 | 5835 | 100 | Plus |
| CG14011-RA | 1167 | CG14011-PA | 1..1167 | 17..1183 | 5835 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14011-RC | 1474 | CG14011-RC | 163..1329 | 17..1183 | 5835 | 100 | Plus |
| CG14011-RB | 1477 | CG14011-RB | 166..1332 | 17..1183 | 5835 | 100 | Plus |
| CG14011-RA | 1482 | CG14011-RA | 171..1337 | 17..1183 | 5835 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5579725..5580891 | 1183..17 | 5835 | 100 | Minus |
Blast to na_te.dros performed 2015-03-10 14:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| roo | 9092 | roo DM_ROO 9092bp | 1096..1144 | 423..471 | 119 | 71.4 | Plus |
BS33550.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:28 Download gff for
BS33550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14011-RC | 163..1327 | 17..1181 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:28 Download gff for
BS33550.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5579727..5580891 | 17..1181 | 100 | | Minus |
BS33550.pep Sequence
Translation from 16 to 1182
> BS33550.pep
MAFLGKVNSQGTLIDHELFCMTQPSQQDSDGQAREMGARVLLPRRKGSRT
FIKTCDKDSLVRSMGSPSTVRYVGSSESSSEVNSLDETETSTLRCCSDLS
LGTLKSTKTIEGPRVGELGEDIELQTESETVCLHLGSPSSSTSTDRSSCS
SRSCPSSRSGNNSSDKDSTTSMCSWEEAMSRDDSMLAPLELPLSHSLPSL
RLGSSVGSPPLTYTRRIEPLHIRRSAGEAYENWLSGKQRQCQYKLQAQQA
EREAQRQRTELRQRLAKEKYEQWCQQKAQQTTSTAKLTKPDRSAQLPPQK
NMASVQHHLQEWELHKLRLLEQRRLEQRNAERRRQEEKAARRSQAEEAFS
RWMSNVAQRPKPVPSSQGMKSLRGTVSDIFINPKQWVN*
BS33550.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14011-PC | 388 | CG14011-PC | 1..388 | 1..388 | 1997 | 100 | Plus |
| CG14011-PB | 388 | CG14011-PB | 1..388 | 1..388 | 1997 | 100 | Plus |
| CG14011-PA | 388 | CG14011-PA | 1..388 | 1..388 | 1997 | 100 | Plus |
| CG18266-PA | 486 | CG18266-PA | 221..475 | 139..388 | 333 | 31.2 | Plus |
| CG7251-PB | 321 | CG7251-PB | 21..313 | 150..387 | 290 | 30.2 | Plus |
