BS33551.complete Sequence
1421 bp assembled on 2015-03-10
GenBank Submission: KX802491
> BS33551.complete
GAAGTTATCAGTCGACATGTTGCGGCAGAAGCTTAAAAACTATTTACCGT
CTGTTTGGGAACAGCAACTGCGTCTCGTCCAAACTGCCAAGAAAGCGGGA
GGTAGCAAAAAGCTGGGTCCCGATAGGCCTCCCATTATCGATCCGCCCAA
GGGATATGAGCCCAATTGCAAGACCAAATTTGGTCCGCTGGACGATTGTG
ATCGTGTGTTTCAGAATCTCTATGGACGCCACGATTGGCGCTTGCATGGA
GCATGCCAACGTGGGGATTGGCATCGCACCGCTGAGTTGCTGGAGCAGGG
TCCCGAATGGATCATGAAGCAGTGGGAATTTCTACGCCAGACCAAGTCCG
AGAAGGTGCCCAAAATGGTCATCGTGAACTGTGCAGAGGGAGAGCCCGGA
ACCTGCAAGGACCGTGATATCCTGCGACATGAACCCCACAAACTGATAGA
AGGTATCCTTCTGGTAGGTGTGGCCATGGGATGCGGTAGAGCCATTGTGT
ACATTCGAAATCGCTTCTACAACGAGGCCTGCAACCTGCACTTTGCCTTG
GCGGAGGCCTATCATCATGGTTTGTTGGGAAACAGTGTCTGTGGCACGGG
CATCAAGTTCGATGTGATGGTCCAGCGTGGAGATCGGTACTTATGTGGCG
AGGAAACCGCCATGATCAACTGTTTGATGGGTAAACTGGGAAGACCACGA
CGTCGTCCGCCCTTCCTTACGGAAAAGGGCTACTTCGAGCATCCCTGTTT
GGTAATCAATGCCGAGTCGATTGCAGTAGTGCCCACCATTCTGCGAAGAG
GTTCACAGTGGTGGGCTGGATTGGGTCGCAGTTACAACACGGGAACCAAA
CTTTACTGTCTCAGCGGTCAGGTGAATAATCCCTGCACTGTGGAGGAAGA
AATGTCCATACCCCTGAAGGACCTTATAGAACGACATGCTGGTGGAGTAA
AAGGTGGTTGGGACAATCTCGCAGCAGTATTTCCAGGTGGTTTGTCCACG
CCATTGTTGGATCCATCAACTGCCGGAAAGGTTCTCATGGATTTCGATAG
TTTGACGGATGCAGGCAGTGGTTTCGGGTGCGGAGCGGTTATTGTGATGA
CCAAGGACTGTGATCCTCTGGCAATAATGTTGCGATCAATTCAGTTTTTC
GAAAAGCACACTTGCAAACAGTGCTCCTATTGTCGCGATGGTGCCATATG
GCTGCCGGAGATATTCGCCCGCTTTGTTAAGGGTCAGACACATCCCCACG
AGATCGATTGGACGCTGGTCATTGCCGATAAAATGAGGAATAGTAAGCCC
ATTTGCGCACTCGCTTATAGCCAAGTCAGCGTGGCCGAAAGTTTGGTGCG
AATGTTTAGCCGGAAGATCGAGGAACGCCTTTTAAAATATGCCAAGGGAT
CTTAAAAGCTTTCTAGACCAT
BS33551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8102-RB | 1389 | CG8102-PB | 1..1389 | 17..1405 | 6750 | 99.1 | Plus |
| CG8102-RA | 1446 | CG8102-PA | 362..1446 | 321..1405 | 5230 | 98.8 | Plus |
| CG8102-RA | 1446 | CG8102-PA | 1..306 | 17..322 | 1530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8102-RB | 1509 | CG8102-RB | 48..1436 | 17..1405 | 6750 | 99.1 | Plus |
| CG8102-RA | 1566 | CG8102-RA | 409..1493 | 321..1405 | 5230 | 98.8 | Plus |
| CG8102-RA | 1566 | CG8102-RA | 48..353 | 17..322 | 1530 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15296837..15297921 | 1405..321 | 5230 | 98.8 | Minus |
| 2R | 25286936 | 2R | 15297977..15298282 | 322..17 | 1530 | 100 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:08:27 has no hits.
BS33551.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:31 Download gff for
BS33551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8102-RB | 53..1434 | 22..1403 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:31 Download gff for
BS33551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15296839..15297919 | 323..1403 | 98 | <- | Minus |
| 2R | 15297977..15298277 | 22..322 | 100 | | Minus |
BS33551.pep Sequence
Translation from 16 to 1404
> BS33551.pep
MLRQKLKNYLPSVWEQQLRLVQTAKKAGGSKKLGPDRPPIIDPPKGYEPN
CKTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIM
KQWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKLIEGILLV
GVAMGCGRAIVYIRNRFYNEACNLHFALAEAYHHGLLGNSVCGTGIKFDV
MVQRGDRYLCGEETAMINCLMGKLGRPRRRPPFLTEKGYFEHPCLVINAE
SIAVVPTILRRGSQWWAGLGRSYNTGTKLYCLSGQVNNPCTVEEEMSIPL
KDLIERHAGGVKGGWDNLAAVFPGGLSTPLLDPSTAGKVLMDFDSLTDAG
SGFGCGAVIVMTKDCDPLAIMLRSIQFFEKHTCKQCSYCRDGAIWLPEIF
ARFVKGQTHPHEIDWTLVIADKMRNSKPICALAYSQVSVAESLVRMFSRK
IEERLLKYAKGS*
BS33551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8102-PB | 462 | CG8102-PB | 1..462 | 1..462 | 2512 | 100 | Plus |
| CG8102-PA | 481 | CG8102-PA | 1..481 | 1..462 | 2482 | 96 | Plus |
| CG9140-PB | 474 | CG9140-PB | 35..470 | 43..460 | 1127 | 49.8 | Plus |
| CG9140-PA | 474 | CG9140-PA | 35..470 | 43..460 | 1127 | 49.8 | Plus |
| CG11423-PA | 702 | CG11423-PA | 221..677 | 23..459 | 1108 | 47.9 | Plus |
