BS33554.complete Sequence
731 bp assembled on 2015-03-10
GenBank Submission: KX802415
> BS33554.complete
GAAGTTATCAGTCGACATGGCCAGTGCACAAGTGCAAAGTTTTGATATTA
TGAAGCAGCAGGATCAGCAACATCAGCTGAACAGTATCCATAAGCATCAT
CATCACCACGAAGGTGTTCCACTGGAGAGCAATAGCCCAGAACCTATCGA
TGAAGAGATATACCAAGTCGAGTACAAGCATCCTTTGGAGCATGTGTGGA
CTTTGTGGTATTTGGAAAACGATCGCACCAAGCACTGGAAGGACATGCTA
AACGAGATTACCGAGATTGACAGTGTGGAGACCTTCTGGAGCTTGTACCA
TACAATCAAGACCCCAGCCGAGCTGAAGATTGGATGCGATTACTCCGTGT
TCAAGAAGGGCATAAAACCCATGTGGGAGGATGAAGCCAACATCAAGGGT
GGTCGCTGGCTGGTCACCGTGAGTAAGAGTGCCAAGGCGGAATTGGATCA
AATTTGGCTGGACATTCTACTGCTGATGGTGGGCCAAAATTTTGAATACT
CCGACGAGATCTGCGGAGCTGTCATCAATATACGTAACAAGAGCAACAAA
ATCTCGGTTTGGACTGCCAACGGGAGTAACGAAATGGCCATTCTGGAGAT
CGGCCAGAAGCTGAAGATACTCCTTCATTTGCAATCGCATAGTTTGCAGT
ATCAACTTCATTCCGATGCAATGTCCAAATTCAATTCGGGCGTCAAATCG
GTTTATACACTCTGAAAGCTTTCTAGACCAT
BS33554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-5-RA | 699 | CG8277-PA | 1..699 | 17..715 | 3435 | 99.4 | Plus |
| eIF4E-7-RA | 1290 | CG32859-PA | 877..1008 | 305..436 | 240 | 78.8 | Plus |
| eIF-4E-RI | 780 | CG4035-PI | 254..471 | 192..409 | 235 | 73.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-5-RA | 1020 | CG8277-RA | 158..862 | 15..719 | 3465 | 99.4 | Plus |
| eIF4E-7-RA | 1638 | CG32859-RA | 1008..1139 | 305..436 | 240 | 78.8 | Plus |
| eIF-4E-RI | 1793 | CG4035-RI | 1015..1232 | 192..409 | 235 | 73.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7895037..7895388 | 15..366 | 1715 | 99.1 | Plus |
| 3L | 28110227 | 3L | 7895446..7895633 | 367..554 | 925 | 99.5 | Plus |
| 3L | 28110227 | 3L | 7895687..7895851 | 555..719 | 825 | 100 | Plus |
| X | 23542271 | X | 1159098..1159229 | 436..305 | 240 | 78.8 | Minus |
| 3L | 28110227 | 3L | 8229642..8229704 | 176..238 | 180 | 85.7 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:34 has no hits.
BS33554.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:34 Download gff for
BS33554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| eIF4E-5-RA | 160..857 | 17..714 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:34 Download gff for
BS33554.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7895039..7895388 | 17..366 | 99 | -> | Plus |
| 3L | 7895446..7895633 | 367..554 | 99 | -> | Plus |
| 3L | 7895687..7895846 | 555..714 | 100 | | Plus |
BS33554.pep Sequence
Translation from 16 to 714
> BS33554.pep
MASAQVQSFDIMKQQDQQHQLNSIHKHHHHHEGVPLESNSPEPIDEEIYQ
VEYKHPLEHVWTLWYLENDRTKHWKDMLNEITEIDSVETFWSLYHTIKTP
AELKIGCDYSVFKKGIKPMWEDEANIKGGRWLVTVSKSAKAELDQIWLDI
LLLMVGQNFEYSDEICGAVINIRNKSNKISVWTANGSNEMAILEIGQKLK
ILLHLQSHSLQYQLHSDAMSKFNSGVKSVYTL*
BS33554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| eIF4E-5-PA | 232 | CG8277-PA | 1..232 | 1..232 | 1241 | 100 | Plus |
| eIF4E-4-PA | 229 | CG10124-PA | 44..227 | 47..230 | 666 | 62 | Plus |
| eIF-4E-PC | 248 | CG4035-PC | 25..248 | 2..232 | 665 | 53.8 | Plus |
| eIF-4E-PI | 259 | CG4035-PI | 36..259 | 2..232 | 665 | 53.8 | Plus |
| eIF-4E-PH | 259 | CG4035-PH | 36..259 | 2..232 | 665 | 53.8 | Plus |
