BS33556.complete Sequence
464 bp assembled on 2015-03-10
GenBank Submission: KX801568
> BS33556.complete
GAAGTTATCAGTCGACATGGAAAAATGCATTATTTGCGTAGATAACTTGA
GAAAATACAAGTGCAGCAAATGCTCGGCACCCTACTGCTCTGTGGCTTGT
TATAAGACACACAGGGATTCGCCCCAATGTGCGACAAGGGAGTCCGACTT
GAAAAAGACTGAAGTTGGCTACCAGGAGGAACCTACGCTTCATGTGCCCT
TCCCCACCGACGACACAGTTGCCGCGGAGAAGCTCCAGCAACTAGAAAAC
TGCCAGGAACTGCGTAATTTGCTCCACAATCCACACCTGCGTTCGCTGCT
CCAGCAGATTGATGTGGCCATCAATGCCCAGTCGGCCATGATGGCCGCCA
TGCAGGAGCCACTCTTCGTGGAGTTCGCTAATGCCTGCCTTCAAGTCGTC
GAACCGATGACGGATGCGGAGCGAACTGAATTTGAGTTGTACTCCTGAAA
GCTTTCTAGACCAT
BS33556.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8204-RB | 432 | CG8204-PB | 1..432 | 17..448 | 2130 | 99.5 | Plus |
| CG8204-RA | 432 | CG8204-PA | 1..432 | 17..448 | 2130 | 99.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8204-RB | 506 | CG8204-RB | 30..462 | 17..449 | 2135 | 99.5 | Plus |
| CG8204-RA | 735 | CG8204-RA | 259..691 | 17..449 | 2135 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15573188..15573393 | 449..244 | 1000 | 99 | Minus |
| 2R | 25286936 | 2R | 15573450..15573610 | 245..85 | 805 | 100 | Minus |
| 2R | 25286936 | 2R | 15573666..15573733 | 84..17 | 340 | 100 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:08:38 has no hits.
BS33556.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:37 Download gff for
BS33556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8204-RB | 30..460 | 17..447 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:37 Download gff for
BS33556.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15573190..15573391 | 246..447 | 99 | <- | Minus |
| 2R | 15573450..15573610 | 85..245 | 100 | <- | Minus |
| 2R | 15573666..15573733 | 17..84 | 100 | | Minus |
BS33556.pep Sequence
Translation from 16 to 447
> BS33556.pep
MEKCIICVDNLRKYKCSKCSAPYCSVACYKTHRDSPQCATRESDLKKTEV
GYQEEPTLHVPFPTDDTVAAEKLQQLENCQELRNLLHNPHLRSLLQQIDV
AINAQSAMMAAMQEPLFVEFANACLQVVEPMTDAERTEFELYS*
BS33556.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8204-PB | 143 | CG8204-PB | 1..143 | 1..143 | 759 | 100 | Plus |
| CG8204-PA | 143 | CG8204-PA | 1..143 | 1..143 | 759 | 100 | Plus |
