BS33561.complete Sequence
1034 bp assembled on 2015-03-10
GenBank Submission: KX802343
> BS33561.complete
GAAGTTATCAGTCGACATGGCCGATATACCTAATGCGGTGGGAATTGGCC
AGCAAAATGATTGCGGGTTGATACGGACGTGCCGCATGCTCCATTTAAAG
CCAACGGAGCTTATCAGTCAGCTGCTGCCAAACACCCAAGTTTTGCAAAA
ACTACGCTATCTCTCCGTGGGGAGCATGTCGCAAGCGGCTCTGGAGGAGG
TCTTTACAAACTGCAGGCAGCTTGAGAGCCTACTTCTGTGCGACACGATG
GGTACCGGCACCACTTACGACATTCGGAGCATTAGGCTCTGCCAGATGTT
GAAGGTGCTGCTGATGCCCCTGAATGTGGGAACGCCACTGGCCGTCTGCT
CCCTGGTGAACCTCACCCATCTCACGCTTCAGCGCCACAAACTCAGTCAA
GGAATGGAGTGGATGCCCACCGTTCTGGCCATCATCCATACCAAGCGGTT
CGATCTCCAAGGACTCACCTTTGATGGTTCCGGGCTGGCCGCTCCCATGA
ATCTTTCCCACCTTCAGCTGGCTCAATGCACAGCCCTCACCGACCTGAGA
TTGAGCAACTGCTATCTGGCTGAAACGGACAGCCCGCCAGTGCCCTTCTC
CTGCCAACGGCTCAGCTTCCGGCGATGCATAATAGGCAAATCGTTTGGTT
ACATGCATCCGCTTCTGAGGAAACTGGATCTGTTTAACTGTCAGATATTG
TTTGAAACTCCCATGCTACGCCGCCTCCTGAACTTAAGAAGGCATCAGCC
CATCGAAGGTCCACTCCTGCTCACCTTTAGCCAGTCCCTCAGACTGCGAT
CTGAGCTGACGAAGTGGTCCCAGGAGGACGTGAGTGCAAGCAGCCGGTGG
CTGCAAGTCAAGGAAGTGGATCCTCACCAGGCGACTACATGGCACCAGCC
ATGTCGCACGCTTTCCATGAAGTTTGGCCGCGCCGTAAGTTATATACCCG
ATCTCAATCTCCCAGAGGAGAGTATCCCGAGTGCCGCTGATGTACTCAGT
TCTCTGGATTCTTTATAAAAGCTTTCTAGACCAT
BS33561.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:09:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12590-RA | 1002 | CG12590-PA | 1..1002 | 17..1018 | 4995 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12590-RA | 1290 | CG12590-RA | 140..1142 | 17..1019 | 5000 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5159751..5160753 | 17..1019 | 5000 | 99.9 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:09:03 has no hits.
BS33561.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:50 Download gff for
BS33561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12590-RA | 140..1139 | 17..1016 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:50 Download gff for
BS33561.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5159751..5160750 | 17..1016 | 99 | | Plus |
BS33561.pep Sequence
Translation from 16 to 1017
> BS33561.pep
MADIPNAVGIGQQNDCGLIRTCRMLHLKPTELISQLLPNTQVLQKLRYLS
VGSMSQAALEEVFTNCRQLESLLLCDTMGTGTTYDIRSIRLCQMLKVLLM
PLNVGTPLAVCSLVNLTHLTLQRHKLSQGMEWMPTVLAIIHTKRFDLQGL
TFDGSGLAAPMNLSHLQLAQCTALTDLRLSNCYLAETDSPPVPFSCQRLS
FRRCIIGKSFGYMHPLLRKLDLFNCQILFETPMLRRLLNLRRHQPIEGPL
LLTFSQSLRLRSELTKWSQEDVSASSRWLQVKEVDPHQATTWHQPCRTLS
MKFGRAVSYIPDLNLPEESIPSAADVLSSLDSL*
BS33561.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12590-PA | 333 | CG12590-PA | 1..333 | 1..333 | 1729 | 100 | Plus |
