BS33564.complete Sequence
1487 bp assembled on 2015-03-10
GenBank Submission: KX800461
> BS33564.complete
GAAGTTATCAGTCGACATGGAGCCTAAACATGGCGTTTCAACCACTAGCT
TTTCTTCCACGAAAACACTTGTTCGTGAAGGGGAATCAATACCGCAAGAC
AATAATAAGTCGATAAGCTCAACGATCGAAGAGGATCTGTTGCAGCAAAA
TAAATCCGAGAAGGAAAAGACCAAGGGCACATCTACCGACAAAAGTACCA
CTACCGATGGCGACCTACCTACGGTTAAGATGGACAAAATACTACAGCAA
CAGCGGGCCGAACTCTTGTGGAAGACGTTCACGGATGAGGAGTACAGCGA
CTGGAAAACGTTCAAGGACAGCAACTACAAGGTCCCGCTGCTTTCTGTGT
TCTCCTACGTCAAGAGTAAACCCTTCATAGCTGAAATACCCAATTTGCCG
CCCAAGATATCGGGGCCGCAATTGATGACCAATATTCTTAAGAGCAACTA
TGGCGCCCTCGCCCTCGTTCAGATCGGAGAGAACAAATTCAAATGCATTC
CCTGCCTGCTCAGGTGCTTCTCGGTGTGGTTTGGTATACGCGACTGGCGG
ATAACCCGGTTCAAGTTCAAGGAGAGAGAGGTGCCTTCCGGCGGCTTCAA
GGTCGTCTACGAATGGATGCGCACCAACAAGCTGCCTGAATTCGACGAAC
TGGTGCCCGCTCTCCAAGTCGCGTGCCACCTGAAGGTAACCCTGCTGGAG
AAGGAAATCTGGCAGATCCTGTCCGATGAGTCTGTGCGGGAGAAGGTGGC
CTTCCTGGTCTACCTGGGCGCAAGGCGGATGCCGGCGCTCGGCGCGCTCT
GCGAAGCTATGCTGTTCCGGTTGAGGAAATACTTCCTGGCGCTGGTGGGT
AGCCCACACTTCGTGCGTCTGAAAGTGGACGTTCTGGAAATGTTACTGCG
CCAGGACTCGATCGGTGTTAATTCGGAGATGGAGGTGTTCTTTGCCGTGA
TACGTTGGCTGGGGCACTCTCGCGGCCGTAAGCGCCGGGAGCACTTTCAG
CGTCTGATGAAGTGCGTCCGCTTCCACCATATGCCAATGACTTTTTTGTT
TAGCCTGCGCGAGTCTTTCAACCATCCGGAGAAGTTTGACCTCTTTAGCA
AGGAACCCGGGATGTTGGCATTCAATACGGACCCGGAGATGATGGAATTG
CTGGAGCACGCCATATACTTTATCAGTGTGCGCACCCAGTGCGATGACAT
CAACGAGTTTTTGTCCACCTGCGAAAGCCACCACATAGAAGTGGTCTTAC
CACGTTGGTGGGTCTATCACGTCAATTGCCCGTTCCACCTACGCACCATT
GACTTCCCATACCAGCACCGCTTCACAGCCACGGATTTTGGCGACTACAT
TGACAGCATCCAGAAGGTATGGTCTGGCAAGGGGCCGCCGGACGACGGAA
AGGACCTGGTTATCGACCTGGCTCTAGATCCTCTGCGAGGCGGGCAGGTG
GATGGAAAGGCCAAAGAGTGAAAGCTTTCTAGACCAT
BS33564.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:09:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9970-RA | 1455 | CG9970-PA | 1..1455 | 17..1471 | 7125 | 99.3 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9970-RA | 1631 | CG9970-RA | 67..1521 | 17..1471 | 7125 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2915134..2916588 | 1471..17 | 7125 | 99.3 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:09:06 has no hits.
BS33564.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:52 Download gff for
BS33564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9970-RA | 67..1520 | 17..1470 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:52 Download gff for
BS33564.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2915135..2916588 | 17..1470 | 99 | | Minus |
BS33564.pep Sequence
Translation from 16 to 1470
> BS33564.pep
MEPKHGVSTTSFSSTKTLVREGESIPQDNNKSISSTIEEDLLQQNKSEKE
KTKGTSTDKSTTTDGDLPTVKMDKILQQQRAELLWKTFTDEEYSDWKTFK
DSNYKVPLLSVFSYVKSKPFIAEIPNLPPKISGPQLMTNILKSNYGALAL
VQIGENKFKCIPCLLRCFSVWFGIRDWRITRFKFKEREVPSGGFKVVYEW
MRTNKLPEFDELVPALQVACHLKVTLLEKEIWQILSDESVREKVAFLVYL
GARRMPALGALCEAMLFRLRKYFLALVGSPHFVRLKVDVLEMLLRQDSIG
VNSEMEVFFAVIRWLGHSRGRKRREHFQRLMKCVRFHHMPMTFLFSLRES
FNHPEKFDLFSKEPGMLAFNTDPEMMELLEHAIYFISVRTQCDDINEFLS
TCESHHIEVVLPRWWVYHVNCPFHLRTIDFPYQHRFTATDFGDYIDSIQK
VWSGKGPPDDGKDLVIDLALDPLRGGQVDGKAKE*
BS33564.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9970-PA | 484 | CG9970-PA | 1..484 | 1..484 | 2569 | 100 | Plus |
| CG12692-PC | 553 | CG12692-PC | 60..346 | 146..434 | 325 | 32.4 | Plus |
| CG12692-PB | 553 | CG12692-PB | 60..346 | 146..434 | 325 | 32.4 | Plus |
| CG12857-PA | 440 | CG12857-PA | 107..406 | 140..450 | 290 | 27.8 | Plus |
| CG30357-PA | 451 | CG30357-PA | 107..430 | 127..451 | 214 | 26 | Plus |
