BS33568.complete Sequence
1250 bp assembled on 2015-03-10
GenBank Submission: KX804093
> BS33568.complete
GAAGTTATCAGTCGACATGGCAGCTTGGCTCACAGCTGAATACCTGGAAG
CGGCACTGCGTCGGTATTACCAGAACAACGAACTTCGAGTGGAATCGATG
GTTATAAATCCCGCTTTAGGGAAAGGAGAAAACTATGGTGCTATCCTAAC
ACGCATACACCTTGTGTACAGCAGCATAGTCGAGGAACATCTGATTGCCA
AGACTGTTCTAGAGTATGAAGACGCGGAGACGAAAATGAAGAAAGCCCCA
TATGATATTTACAATCGGGAACTGGAGATTTACGAGCAAGTGTTACCAAA
ATTGCAGGAACTAGCCGGCGAGCAACTATGTCCTAAAATACTACACATCG
ATCGTCAAAGAGGAGCACTCATAATGGAAGATCTGAGCTACAAGGGATTT
GTGATGGCCCCGAGACTTCAGAGATTGGATGAGCAGCATGTGAGTTTGGT
TCTTAGGAAGTTGGCCAAAATGCAGGCAGCATCAGCGGTTTTGGAGAACA
ATCTTTTGGAAAATAACTTCTCTCTCACTGAATACGATAAAGGCTTCTTC
AATAGGTATACAGAAAGCTTTAGTGCCTACTTTCTGGGCTGCCTCAAGTC
CTGTGCCAATTACCTTAAAACTCAGGCGGGTTATGAACACCACGCAAAAC
TATTAGACGAACTGGCTCCCTATTATATGGGACTAGGACTCCGCTGTTTT
AAGCAAGAGCAAACGCACATTAATGTCCTTACCCACGGCGACTTGTGGAC
AAACAACATGATGTTCAAATACGAGGCGGGCGTGCCGAGCGATGTCCTTC
TGATTGACTTTCAGTACGCCTTCTGGGGTTCGCCCACCCTGGACATCCAT
CATCTGCTCAACACGTCGGCTGTGGAGCAAGTGCGGAGTGAGCTGCAAAT
GAAGATGAGAGGTGTCTATCACGATGTCTTCGTGGGGGAGCTGCAGAGAC
TTGGCTTCAAAGGTCAAAGGTTGCCCAGTCGAAAGCAGTTTCACCTGGAG
TCAGAGCAAAAACGATTTTACGCCGTTCATTGTGGCCTGCTGCTGCTACC
TGTGCTGCTAAACACCGATGAAACTGATGCGGATTTCGCCGCCCTTCTTT
CGGATCAGCCGCGTGGAATGGATATGAAAAGGCGGCTGTATCTCAACCCT
GGCATCCAGGACTCTATTAAGCAAATGGTGAAGCATTTCGAGCTGGAAGG
GCTCCTGGATCCGTGGCAATACGAAGGCCTCTGAAAGCTTTCTAGACCAT
BS33568.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:09:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31380-RA | 1218 | CG31380-PA | 1..1218 | 17..1234 | 6075 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31380-RA | 1335 | CG31380-RA | 3..1222 | 16..1235 | 6085 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25788447..25789453 | 1022..16 | 5035 | 100 | Minus |
| 3R | 32079331 | 3R | 25788110..25788327 | 1235..1018 | 1060 | 99.1 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:09:11 has no hits.
BS33568.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:54 Download gff for
BS33568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31380-RA | 4..1220 | 17..1233 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:54 Download gff for
BS33568.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25788112..25788322 | 1023..1233 | 99 | <- | Minus |
| 3R | 25788447..25789452 | 17..1022 | 100 | | Minus |
BS33568.pep Sequence
Translation from 16 to 1233
> BS33568.pep
MAAWLTAEYLEAALRRYYQNNELRVESMVINPALGKGENYGAILTRIHLV
YSSIVEEHLIAKTVLEYEDAETKMKKAPYDIYNRELEIYEQVLPKLQELA
GEQLCPKILHIDRQRGALIMEDLSYKGFVMAPRLQRLDEQHVSLVLRKLA
KMQAASAVLENNLLENNFSLTEYDKGFFNRYTESFSAYFLGCLKSCANYL
KTQAGYEHHAKLLDELAPYYMGLGLRCFKQEQTHINVLTHGDLWTNNMMF
KYEAGVPSDVLLIDFQYAFWGSPTLDIHHLLNTSAVEQVRSELQMKMRGV
YHDVFVGELQRLGFKGQRLPSRKQFHLESEQKRFYAVHCGLLLLPVLLNT
DETDADFAALLSDQPRGMDMKRRLYLNPGIQDSIKQMVKHFELEGLLDPW
QYEGL*
BS33568.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31380-PA | 405 | CG31380-PA | 1..405 | 1..405 | 2115 | 100 | Plus |
| CG10514-PA | 413 | CG10514-PA | 7..408 | 4..398 | 949 | 46.6 | Plus |
| CG11892-PA | 439 | CG11892-PA | 36..436 | 4..398 | 825 | 43.4 | Plus |
| CG11892-PB | 439 | CG11892-PB | 36..436 | 4..398 | 825 | 43.4 | Plus |
| CG10513-PB | 422 | CG10513-PB | 18..419 | 4..398 | 647 | 37 | Plus |
