BS33574.complete Sequence
506 bp assembled on 2015-03-10
GenBank Submission: KX801998
> BS33574.complete
GAAGTTATCAGTCGACATGCAGCAAGGCAGGAGACCAGGAACCCAGGAAG
CAAACTCCCTGGATGTTGCATGTTCCTGCCGCCAGCAAGGAAATGAAAAC
GCCCCCATGTGTGAGCCAAAAAGCCAACGACCTGGGCAGGGCAGGCACAA
ACTACAAAGCGGGGGAAAAAAAAATAAACACACCGGAGTCGGAGGAGTCC
TGCCGCAGAGCAACTATAAAAAGGACACCCTGCAACCGTGTGTACCGGAG
TCTCTATCGGTGTCAGCCAGCAGCTTACAAAGTCAGACGCATTTGTGTGT
GTATCTGTGTGTGCCGAACGAAGGACGCTCCCAGCTTTTAAGTATAATTT
TCCAGATACACAGGCCGAGCACTGGAGTCCAGGTGGCAACTGCTAGACAA
AAACGATGTGCACGCCCCCACAAAAAACACACACACACACAGAGACAAGA
ACGTACAGGAGCAGAAGGACCAGAAGGACCAGCCAGCTAAAAGCTTTCTA
GACCAT
BS33574.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:09:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42790-RB | 474 | CG42790-PB | 1..474 | 17..490 | 2370 | 100 | Plus |
| CG42790-RC | 321 | CG42790-PC | 1..280 | 17..296 | 1400 | 100 | Plus |
| CG42790-RC | 321 | CG42790-PC | 281..321 | 356..396 | 205 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42790-RB | 1416 | CG42790-RB | 28..502 | 17..491 | 2375 | 100 | Plus |
| CG42790-RC | 496 | CG42790-RC | 28..307 | 17..296 | 1400 | 100 | Plus |
| CG42790-RC | 496 | CG42790-RC | 308..443 | 356..491 | 680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26784365..26784839 | 17..491 | 2375 | 100 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:09:13 has no hits.
BS33574.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:55 Download gff for
BS33574.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42790-RB | 28..499 | 17..488 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:55 Download gff for
BS33574.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26784365..26784836 | 17..488 | 100 | | Plus |
BS33574.pep Sequence
Translation from 16 to 489
> BS33574.pep
MQQGRRPGTQEANSLDVACSCRQQGNENAPMCEPKSQRPGQGRHKLQSGG
KKNKHTGVGGVLPQSNYKKDTLQPCVPESLSVSASSLQSQTHLCVYLCVP
NEGRSQLLSIIFQIHRPSTGVQVATARQKRCARPHKKHTHTQRQERTGAE
GPEGPAS*
BS33574.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42790-PB | 157 | CG42790-PB | 1..157 | 1..157 | 840 | 100 | Plus |
| CG42790-PC | 106 | CG42790-PC | 1..93 | 1..93 | 496 | 100 | Plus |
