BS33580.complete Sequence
365 bp assembled on 2015-03-20
GenBank Submission: KX805591
> BS33580.complete
GAAGTTATCAGTCGACATGTCGTCTTTGGAGGGAACCGCACCTCCGTCGG
AATTACCTCCTTGCGCTGCAGGATTCACCTGGGTAATTCTAATGAGCACC
TGCCTGCCGGATTTGGCACGCACGAAAAGCCGATGTGTTTATGGATATTA
CTTTAACGAAAAACTAAAAAAATGTATGCGCCGCAGATATGACAAGGAAC
AGAAGCCAGGTGTTATAAGGCAGTGGATGAAGGCTACGACCAAGAAACCG
ACCACTGCAAGAGGACCTTGTTTTCAACGCGAGCAAGCGTACACTGGCAA
CTGGTTTGGCTACAATGCAGGATATGGAAGGAATGAAACGCGTCGTTAGA
AGCTTTCTAGACCAT
BS33580.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-20 11:24:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43272-RB | 174 | CG43272-PB | 1..174 | 176..349 | 840 | 98.9 | Plus |
| CG43272-RA | 174 | CG43272-PA | 1..174 | 176..349 | 840 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-20 11:24:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43272-RB | 410 | CG43272-RB | 25..359 | 17..351 | 1585 | 98.2 | Plus |
| CG43272-RA | 439 | CG43272-RA | 25..356 | 17..351 | 1505 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-20 11:24:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17255443..17255654 | 140..351 | 1030 | 99.1 | Plus |
| 2R | 25286936 | 2R | 17255265..17255387 | 17..139 | 555 | 96.7 | Plus |
Blast to na_te.dros performed on 2015-03-20 11:24:28 has no hits.
BS33580.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-20 11:24:30 Download gff for
BS33580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43272-RB | 25..357 | 17..349 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-20 11:24:30 Download gff for
BS33580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17255265..17255387 | 17..139 | 96 | -> | Plus |
| 2R | 17255443..17255652 | 140..349 | 99 | | Plus |
BS33580.pep Sequence
Translation from 16 to 348
> BS33580.pep
MSSLEGTAPPSELPPCAAGFTWVILMSTCLPDLARTKSRCVYGYYFNEKL
KKCMRRRYDKEQKPGVIRQWMKATTKKPTTARGPCFQREQAYTGNWFGYN
AGYGRNETRR*
BS33580.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-20 11:24:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43272-PB | 57 | CG43272-PB | 1..57 | 54..110 | 321 | 100 | Plus |
| CG43272-PA | 57 | CG43272-PA | 1..57 | 54..110 | 321 | 100 | Plus |
