BS33591.complete Sequence
1229 bp assembled on 2015-03-10
GenBank Submission: KX804159
> BS33591.complete
GAAGTTATCAGTCGACATGAGTGGAGAGGAGGAGTACTTCCAGGAGGAGG
AAGAAGAGGAGCAGGAGCAGGATATTTACGACGATGGCACGGAATACACC
GAACCGGGTGCCCAGAAGGTAGACAAGCCGTCAAAGGACGAGAAGAACGT
GGCCAAGTGGCTGAAGAAGAACGTTAAGACGAAGAAGACCAAATTCCTGA
GCCACATCGTCGAATACTTCACCTCCAGCAAGGCCATCGATGCTCTGCTA
AAGTCCAAATTCACCGAAGGCAGCAATCCGCTTTTCACCACCCGGGAGCA
GGTAATCGAGTTTCTAGACGTGATGCTGGAGCACAAGTTCTTCCATCGCG
CCAAGAAGGTGCCCGTCACTCTGGAGGAGATCAGAGGAAAGTCTGGAGGC
GACAAGAAGGCGGACAAGGAGAAGACCCAAGATAAGGAAAAGGACAAGGC
AAAGGATGAGAAGAAGGATACCGATCCGGAAGGCGATAATGGCCAAGGAG
ACGGAGGTGCGTCTGGCAACGAAAAAGAGAAGGAGAAAAAGGAGAAGAAA
AAGCGCAAGATCCGCCTGGACATGCATCCTGAGCAGATCTTCGTGGACGG
CTCCGAGGCATACGTCTGGATCTACGATCCCATACCGCTCCACTACTGGA
TATTCGGCTTCATCCTGCTACTTGGCGCCGTTGGCATTTGCCTATTCCCT
CTGTGGCCTCCACTGCTACGCAAGGGTGTCTACTACTTGTCCATTGCGGC
TGCCGGCTTCCTTGTTTTCATCCTGGCTCTGACAATTGTACGTCTAATTG
TGTTCATCATCGTGTGGGCATTAACCGGCGGCAAGTTGCACTTCTGGATC
TTCCCCAACCTGACTGAGGATGTGAGCTTCTTCGCCTCCTTCTGGCCACT
ATATGAGAGTAACTATAACAGTGACCCAAATAATTCGTCCGCCAAGACCG
ACAAGAAATCGAAATCGAAGGACAAGAAGAAGGAAAAAGAAAGCGATGCC
GAGGACACAGCCGTGGATGCGGATGGAGACGCTGACGGTGATGTGGATGC
TGAGGTTTCCACGCTTGAACCAGAGAAAATCGAGCTCATCAAAGAACATG
ACACCGACATGGAGATCCGCAAACGTCGCAAAGTGGGTGCCGATGACTAC
GAGGAAGACGATGTGGATGAAGAAGAAACGAAGGCGCAGCCCAAGGATTC
CAAAGCTGGGTAAAAGCTTTCTAGACCAT
BS33591.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trp1-RC | 1197 | CG4758-PC | 1..1197 | 17..1213 | 5970 | 99.9 | Plus |
| Trp1-RB | 1287 | CG4758-PB | 1..1193 | 17..1209 | 5950 | 99.9 | Plus |
| Trp1-RD | 1158 | CG4758-PD | 37..1158 | 92..1213 | 5595 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trp1-RC | 1532 | CG4758-RC | 130..1326 | 17..1213 | 5970 | 99.9 | Plus |
| Trp1-RB | 2093 | CG4758-RB | 130..1322 | 17..1209 | 5950 | 99.9 | Plus |
| Trp1-RD | 1484 | CG4758-RD | 157..1278 | 92..1213 | 5595 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10010736..10011552 | 91..907 | 4085 | 100 | Plus |
| 2L | 23513712 | 2L | 10011605..10011912 | 906..1213 | 1525 | 99.7 | Plus |
| 2L | 23513712 | 2L | 10010483..10010558 | 17..92 | 380 | 100 | Plus |
Blast to na_te.dros performed 2015-03-10 14:08:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| TAHRE | 10463 | TAHRE OSV 10463bp | 6452..6494 | 951..992 | 113 | 76.7 | Plus |
BS33591.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:47 Download gff for
BS33591.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Trp1-RC | 130..1324 | 17..1211 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:47 Download gff for
BS33591.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10010483..10010557 | 17..91 | 100 | -> | Plus |
| 2L | 10010737..10011552 | 92..907 | 100 | -> | Plus |
| 2L | 10011607..10011910 | 908..1211 | 99 | | Plus |
BS33591.pep Sequence
Translation from 16 to 1212
> BS33591.pep
MSGEEEYFQEEEEEEQEQDIYDDGTEYTEPGAQKVDKPSKDEKNVAKWLK
KNVKTKKTKFLSHIVEYFTSSKAIDALLKSKFTEGSNPLFTTREQVIEFL
DVMLEHKFFHRAKKVPVTLEEIRGKSGGDKKADKEKTQDKEKDKAKDEKK
DTDPEGDNGQGDGGASGNEKEKEKKEKKKRKIRLDMHPEQIFVDGSEAYV
WIYDPIPLHYWIFGFILLLGAVGICLFPLWPPLLRKGVYYLSIAAAGFLV
FILALTIVRLIVFIIVWALTGGKLHFWIFPNLTEDVSFFASFWPLYESNY
NSDPNNSSAKTDKKSKSKDKKKEKESDAEDTAVDADGDADGDVDAEVSTL
EPEKIELIKEHDTDMEIRKRRKVGADDYEEDDVDEEETKAQPKDSKAG*
BS33591.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Trp1-PC | 398 | CG4758-PC | 1..398 | 1..398 | 2088 | 100 | Plus |
| Trp1-PB | 428 | CG4758-PB | 1..398 | 1..398 | 2088 | 100 | Plus |
| Trp1-PD | 385 | CG4758-PD | 13..385 | 26..398 | 1955 | 100 | Plus |
| Trp1-PA | 415 | CG4758-PA | 13..385 | 26..398 | 1955 | 100 | Plus |
