BS33595.complete Sequence
329 bp assembled on 2015-03-10
GenBank Submission: KX801882
> BS33595.complete
GAAGTTATCAGTCGACATGAAACTGCTTGGACTTGGGGCGCAGGTTTTGA
GGCTCAAAACTGGCGGGCAGAGTCGCTCTGCGAAAACTTGCCCACCGGAA
GTTCGCCAGCCCTTGCCGTGCTGTCCCAAAAAACGCTTTTGGACTTTCAA
GCGAGTAATATGTTTCTCGACGTTAACTTTTGGCGCCGGGGTGTATACGG
GAATCTATGTCTCACAGAACTATGAGGTCCCCCGAGTGGATGATCCCCAG
AAGTTGATGCAGCGTTTCAACGAGAAACTCAAAGAACTAATGGATCAAAC
CAAGAACAAGTAAAAGCTTTCTAGACCAT
BS33595.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33170-RA | 297 | CG33170-PA | 1..297 | 17..313 | 1470 | 99.7 | Plus |
| CG33170-RC | 216 | CG33170-PC | 15..152 | 172..309 | 690 | 100 | Plus |
| CG33170-RB | 216 | CG33170-PB | 15..152 | 172..309 | 690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33170-RA | 842 | CG33170-RA | 56..356 | 17..317 | 1475 | 99.3 | Plus |
| CG33170-RC | 357 | CG33170-RC | 84..221 | 172..309 | 690 | 100 | Plus |
| CG33170-RB | 599 | CG33170-RB | 326..463 | 172..309 | 690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22865541..22865696 | 17..172 | 765 | 99.4 | Plus |
| 3L | 28110227 | 3L | 22865876..22865968 | 225..317 | 450 | 98.9 | Plus |
| 3L | 28110227 | 3L | 22865770..22865826 | 172..228 | 285 | 100 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:41 has no hits.
BS33595.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:38 Download gff for
BS33595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33170-RA | 56..350 | 17..311 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:38 Download gff for
BS33595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22865541..22865696 | 17..172 | 99 | -> | Plus |
| 3L | 22865771..22865824 | 173..226 | 100 | -> | Plus |
| 3L | 22865878..22865962 | 227..311 | 100 | | Plus |
BS33595.pep Sequence
Translation from 16 to 312
> BS33595.pep
MKLLGLGAQVLRLKTGGQSRSAKTCPPEVRQPLPCCPKKRFWTFKRVICF
STLTFGAGVYTGIYVSQNYEVPRVDDPQKLMQRFNEKLKELMDQTKNK*
BS33595.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33170-PA | 98 | CG33170-PA | 1..98 | 1..98 | 524 | 100 | Plus |
| CG33170-PC | 71 | CG33170-PC | 6..51 | 53..98 | 240 | 100 | Plus |
| CG33170-PB | 71 | CG33170-PB | 6..51 | 53..98 | 240 | 100 | Plus |
