BS33596.complete Sequence
881 bp assembled on 2015-03-10
GenBank Submission: KX801861
> BS33596.complete
GAAGTTATCAGTCGACATGCGGATAGACACTCAGATCATGTGGCTAATAA
TTGTGTTATCCTCGCTCCCGGCATCCGCTACTGGCAATCATTATCGAACC
CGCCGAAAGCCAATGCAGACGGAGGACTCAGACCTGATGAGGAGTTTCGC
TGGTGGGCTCGGTGGCGGTGGTCCTGGTGATGGAACCGTGTGCGACATGT
CAGGGGAGGATAGCAACTCGCCGGCAAAGAAGACGCGAAACCATACTAAT
GCCAAACAGCGATCCTCCGGAATCGCCGTCCAGGCGGCCAACGAGGCTAA
AAAGGCAAACGATGATATGAAAAACGCCGTTAAGGAGGCCGCTGATAAAA
TCAAAGGCGAATACGCAGACAAGGCAAACGCTGCGGCCAAAGCTGCCGAA
GCAGTGCTGTTCGGAAAGAGTCAGGTGCTGGAGCAATTGGAAGCGGAGGT
CAGGGAGGCCGAAATGGTGGTGCAGGAGGAAAACCAGGAGCTGATCACCG
CCGAGTCGAATGCACAGCTTGCCGCCAAGACGCACCAATTGGTCCAGCAG
GAGCTCAAGACACTGACCATAAGCCTCAAGTTGGCCAAGGACATCAAGGA
TGCCTCAGATCAAGTGTACACAGTGTGGCAACAATCGCTCGCCGACAAGA
CGGCACTATTAGAAGCTGCCCAGCGGCGGGTTAATGTCCTAATGCGGCAA
CTTAGCGAAGCTCGATTAGATTACGATAAGACCAAGAAGGCGGCACTAAG
TGCCGCCAAAGCAGCCCAAGAGGCCAAACAGCGTATAGATCAATCGGAGT
GTGAAGGCGGTTCTCGTGGCAGAAGGGGGCGACGAGCGTGGCTGGAGTAC
AAGGAACACCATTGAAAGCTTTCTAGACCAT
BS33596.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:08:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14839-RA | 849 | CG14839-PA | 1..849 | 17..865 | 4170 | 99.4 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:08:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14839-RA | 981 | CG14839-RA | 75..923 | 17..865 | 4170 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:08:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14262461..14263309 | 17..865 | 4170 | 99.4 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:08:43 has no hits.
BS33596.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:11:39 Download gff for
BS33596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14839-RA | 75..922 | 17..864 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:11:39 Download gff for
BS33596.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14262461..14263308 | 17..864 | 99 | | Plus |
BS33596.pep Sequence
Translation from 16 to 864
> BS33596.pep
MRIDTQIMWLIIVLSSLPASATGNHYRTRRKPMQTEDSDLMRSFAGGLGG
GGPGDGTVCDMSGEDSNSPAKKTRNHTNAKQRSSGIAVQAANEAKKANDD
MKNAVKEAADKIKGEYADKANAAAKAAEAVLFGKSQVLEQLEAEVREAEM
VVQEENQELITAESNAQLAAKTHQLVQQELKTLTISLKLAKDIKDASDQV
YTVWQQSLADKTALLEAAQRRVNVLMRQLSEARLDYDKTKKAALSAAKAA
QEAKQRIDQSECEGGSRGRRGRRAWLEYKEHH*
BS33596.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14839-PA | 282 | CG14839-PA | 1..282 | 1..282 | 1408 | 100 | Plus |
| CG14840-PA | 300 | CG14840-PA | 4..265 | 5..260 | 371 | 37.8 | Plus |
| CG11694-PA | 261 | CG11694-PA | 39..239 | 52..256 | 366 | 44.4 | Plus |
| CG14354-PA | 298 | CG14354-PA | 60..238 | 78..256 | 365 | 45.3 | Plus |
| CG34459-PC | 305 | CG34459-PC | 60..294 | 32..256 | 337 | 40.1 | Plus |
