BS33672.complete Sequence
971 bp assembled on 2015-03-10
GenBank Submission: KX805046
> BS33672.complete
GAAGTTATCAGTCGACATGAGTTCCCAGACGCAGAAAAAGAATGCTTCCA
AGGCCAAATCGAAGGCGGGCCCACAGCCGTCGAAGAAAGCCCCGGCTAAG
GTGACTCCTGTAGAAACCGCCACCCCATCTGCGGCTCCGCCTTTGTCCTC
TAAAAAGGTGGCCAAAGCTCCGGCCGTGGCACTAAAGAATCTCGATTTGG
CCATGAAAGAATCGGCTAAGAAGGCCGCCGAAGCTGCTGACCAAAAGTTG
GTCTCGAAGGCGAAGAAAGGGCAGAATGCTTCACGCAAGAACTTGATGCA
AGTGCCGGAACCCGTTGCCCCTGAAGTGGACAATAAGAAAAAGTCAGCGC
CTCCTAAACGTGGCAATGCGGAAATACCCACGGTTGTACCCGCCAAAAAG
GCGGCCCTGGTGCAAGAAAAGCCCAAGGAACAAGCTGCCGCAGCACCAAA
AGCCGAAAATGTCGAGGTTCCAGCAGCCAAAGCTAAAAGTGTAAAAAAGA
GCCTCGCCACTCCGGCAAATCCGAAGCCCAAGCCGAAACGCACGAAGAAT
GTTCTGCGTGGAAAAAGGCTGGCCAAAAAGAAGGCTTGGCAACGCTTTGT
GATCGACTGCGCATGCGTGGCCGAGGATATGATCCTGGACCTCGCCGACT
TCGAGCAGTATTTGAAGACCCACATCAAGATAAAGAACAAGCTCAACCAG
CTGAAGGATCAGGTCACTTTCGAGCGCACCAAGAACTTCTCGCTGATCAT
CCACTCCGGTGTGCACTTCTCCAAGCGCTACTTCAAGTATCTGACCAAAC
GGTATTTGAAGAAGGTCAGCCTGCGCGATTGGTTGCGTGTAGTGTCCACG
GCCAAGGACACCTTCGCCATGACCTACTTCAAGATTCAGGACAAGGACTT
TGATGACGACGACGACGACGTCGCCGACGACAATGGCGGAAAAACCTTTG
CCTAAAAGCTTTCTAGACCAT
BS33672.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL22-like-RA | 939 | CG9871-PA | 1..939 | 17..955 | 4545 | 98.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL22-like-RA | 1232 | CG9871-RA | 119..1059 | 17..957 | 4555 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23246783..23247723 | 957..17 | 4555 | 98.9 | Minus |
Blast to na_te.dros performed on 2015-03-10 14:09:22 has no hits.
BS33672.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:12:02 Download gff for
BS33672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpL22-like-RA | 119..1055 | 17..953 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:12:02 Download gff for
BS33672.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23246787..23247723 | 17..953 | 98 | | Minus |
BS33672.pep Sequence
Translation from 16 to 954
> BS33672.pep
MSSQTQKKNASKAKSKAGPQPSKKAPAKVTPVETATPSAAPPLSSKKVAK
APAVALKNLDLAMKESAKKAAEAADQKLVSKAKKGQNASRKNLMQVPEPV
APEVDNKKKSAPPKRGNAEIPTVVPAKKAALVQEKPKEQAAAAPKAENVE
VPAAKAKSVKKSLATPANPKPKPKRTKNVLRGKRLAKKKAWQRFVIDCAC
VAEDMILDLADFEQYLKTHIKIKNKLNQLKDQVTFERTKNFSLIIHSGVH
FSKRYFKYLTKRYLKKVSLRDWLRVVSTAKDTFAMTYFKIQDKDFDDDDD
DVADDNGGKTFA*
BS33672.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpL22-like-PA | 312 | CG9871-PA | 1..312 | 1..312 | 1578 | 100 | Plus |
| RpL22-PA | 299 | CG7434-PA | 4..297 | 5..299 | 480 | 42.9 | Plus |
