BS33678.complete Sequence
590 bp assembled on 2015-03-10
GenBank Submission: KX805541
> BS33678.complete
GAAGTTATCAGTCGACATGGAGGAGTATTCGCGCGAACCGTGTCCTTTTC
GCATCGTGGACGATTGTGGCGGGGCTTTCACGATGGGCTGCTTCGGAGGC
GGTCTCTTCCAGGGACTAAAGGGATTCCGGAATGCACCTCAAGGGCTCAA
AAGACGGTTCGCCGGCGGATTGGCGGCCGTAAAGTCCAGATCGCCAACCA
TTGGCGGAAATTTCGCCGCATGGGGCTGCGTCTTCAGCATCGTGGATTGC
AGCCTGGTGCATCTGCGCAAGAAGGAGGATCCGTGGAACTCGATCATGAG
CGGAGCGATCGCCGGTGGGATTCTGTCCTCCCGAAACGGAGTAGCCGCCA
TGTTCGGAAGCGCCATCATTGGCGGAGTTCTGCTCTCAATGATCGAGGGC
GTGGGCATTCTGTTCACCCGCATCTCCGCCGAGCAGTTTCGCAATTCTGA
TCCGCAGAACGATCTAGGCAGAGCAGGCGCGTTTGCTTCTGGATCCGGAA
TGGGATCAGGCGATATTAATTCATCACCGGGCTTTGAGTTCCCCGTAGTG
CAGCAGGCCAACGCAACAAGCTAAAAGCTTTCTAGACCAT
BS33678.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2015-03-10 14:09:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1724-RA | 558 | CG1724-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
| Tim17b2-RC | 531 | CG15257-PC | 1..392 | 17..408 | 655 | 77.8 | Plus |
| Tim17b2-RA | 531 | CG15257-PA | 1..392 | 17..408 | 655 | 77.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:09:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1724-RA | 843 | CG1724-RA | 125..688 | 12..575 | 2805 | 99.8 | Plus |
| Tim17b2-RC | 817 | CG15257-RC | 109..500 | 17..408 | 655 | 77.8 | Plus |
| Tim17b2-RA | 761 | CG15257-RA | 109..500 | 17..408 | 655 | 77.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2015-03-10 14:09:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21202654..21203217 | 575..12 | 2805 | 99.8 | Minus |
| 2L | 23513712 | 2L | 15484837..15485228 | 17..408 | 655 | 77.8 | Plus |
Blast to na_te.dros performed on 2015-03-10 14:09:27 has no hits.
BS33678.complete Sim4 Records
Sim4 to dmel-all-transcript-r6.02.fasta performed 2015-03-10 14:12:04 Download gff for
BS33678.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1724-RA | 130..685 | 17..572 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2015-03-10 14:12:04 Download gff for
BS33678.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21202657..21203212 | 17..572 | 100 | | Minus |
BS33678.pep Sequence
Translation from 16 to 573
> BS33678.pep
MEEYSREPCPFRIVDDCGGAFTMGCFGGGLFQGLKGFRNAPQGLKRRFAG
GLAAVKSRSPTIGGNFAAWGCVFSIVDCSLVHLRKKEDPWNSIMSGAIAG
GILSSRNGVAAMFGSAIIGGVLLSMIEGVGILFTRISAEQFRNSDPQNDL
GRAGAFASGSGMGSGDINSSPGFEFPVVQQANATS*
BS33678.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2015-03-10 14:07:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1724-PA | 185 | CG1724-PA | 1..185 | 1..185 | 967 | 100 | Plus |
| Tim17b2-PC | 176 | CG15257-PC | 1..176 | 1..185 | 686 | 73 | Plus |
| Tim17b2-PA | 176 | CG15257-PA | 1..176 | 1..185 | 686 | 73 | Plus |
| Tim17b-PB | 173 | CG40451-PB | 1..167 | 1..160 | 606 | 68.3 | Plus |
| Tim17b-PA | 173 | CG40451-PA | 1..167 | 1..160 | 606 | 68.3 | Plus |
