BDGP Sequence Production Resources |
Search the DGRC for FI01002
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 10 |
Well: | 2 |
Vector: | pFlc-1 |
Associated Gene/Transcript | MED16-RA |
Protein status: | FI01002.pep: gold |
Sequenced Size: | 2763 |
Gene | Date | Evidence |
---|---|---|
MED16 | 2008-04-29 | Release 5.5 accounting |
MED16 | 2008-08-15 | Release 5.9 accounting |
MED16 | 2008-12-18 | 5.12 accounting |
2763 bp (2763 high quality bases) assembled on 2006-09-14
GenBank Submission: BT025233
> FI01002.complete GGTGTTGGCAGACGCCGGGTGCAAAACAATAATAGTCCGCTTTGGTTTTT GTTTACGCTGCAAAAATGACGATTTTGTACAAAGTGGAGGGCAAGGAGTT CAGCAAGGACAGCGTTTTTCCGCACAAGAAGGTCCTCTGCTCAGTCTCCG CACGGAACATCGTTGCGTTTAGCGCCCTCCAGAGCGCCATATTTCCGGCT TCCCACGGAGGAGATGCCGGCGATGGATCCTTGCCGGGAGCGGGTTTGGC CGTAGGCGCGAGCAACAGCCATGTGTACGTGTGCGACATCGTGACGCCGT GGGAATACTATAAGGTGTGCTCCTCCAAATCGCTTATCAGCGTCCTCCAG TGGAGTCCCAATGGGGAGCAACTGCTGCTTGGATACGTCGGCGGTCGCGT CGAGATCTGGCAGCCGAGGAACCAGTCAATTAACCTATGGGTGCTGCAGT ATTACGCCACCGTGCCCAGCGAGGACATTATAGAAGCACAGTTCTTTCAG AATGGCAAAGGAGTGATCTTCAATGCGCTGAAGAAGGATCACACCTACTA TGCGGAGAAGTTCGAGCGGGTGGAGCAGCAGAGGCCCACTCTCAGCGGAT TTGGCGGAGTGGCCAGCGAGGGATGCGTGCTACTCACTTCCTCAGGCCTG CTGGCCGCCTTCAGTCTCCCCGCAATCCAAAAGACATCCGCCGCAGGAGC TGATGGTCCTGCCCACGAGGTCGTCGAGTTGACACCCGCGCTCCACAGCA TCGGCATATCGCGCAGCTTCATCGAACACTGCAGCATGACGCCAAGTCCA TCGGGAGCCCTTAATATCGCTTTCAGCTGTGGCTGGCAGCAACAGTTGGT GCAATGCTTTAAGGTCTCGCTTTCATTGGAGGGCGAACTGGGTCTGGAGC AGCACTTGGCCATCAAATCCGAGTCCCAGACCAGCATATTTCTGGGTCCT CTTGACGGGAGGCGGATCAGTCACCTAAAATGGACGCGAATAGCCAACGA GGATGTGATTTTTATAGCCTACGCTTGTCCAGATGGTGCTGGCAGCCAAC TGGAGCAATGGACATTGACACGCCGTCACCAAAGTGTCCACGCCCTTCTC CAGGGTGGAGGAGGTGCCAACAACAAGCCAAATGAGTTCGTGCAATCGGA AAGCTGGGAGCAGGTGGGCAAAGTGCAACTAAATGCATCCTTGGCGGATA TCAGCGTTACACGACTATCGGTATCAACGCCGGACTCTTGCCAAGTGTAC GCCATTCTGCAGGACAACAGCGTCCAGGTGCTGGAGCCCAACTCGATGAA GCAGCTTAATCACACCCAGTTTGATAGGTTATCTGACGCCAGTGGAGCAG TAAAGTTCGTTAGCGGCGACTTGACACCTAGCAGCCAAATTCTCCTAATC TTTGATAGCCATGCACAACTTTACGCCATGCAGGCACCTCTGCCGAAGCA AGGAGGATCTGGTTTGCTACTTCTGGAATATTGCATCGTTACAGGTTGCG ATGCCAGCGATGTGCTACTCCTTAATCTAGGCAACCTGGAGGCTCTGGTG GAGAAGCTAACCGACAACTTTACGCGGCAACCTTCCTTTGTGCGGCACTT TTATTATGCTAATTTTTTGGCCCTCAAGTCCAACATATGCCGCATGCAGC AGCAGGAGTTTGACAATCTCATTATCCTACACGCAATATCCACCACATTC AAGAGCCTCCTGCGACCGTCTGATCTGGGTTTCCAGGATAAAGGACCTGC CGATAACTTGGCCATCAAGCTGGCCGAATCCATTCCGGATGTGGACACCG TGATGCTGAACCTGGACGCCAAGGACTTTACAGTGGAGCCGGTGATGCTG CAAAGTCTACAGCAACTGATTCAGTGGGTCACCGACCTGGCACTCAACAT GCTGCATCGTCTGCCCGAGGAGGTAATGAAGACCAAGCTCTCCGGAAAGC GGCCTAGCTACGATATCAGCCGAGACATCGTGGCCATCAGCAGTCTGCGC GAGCTGCTGGTTATGATCCGCATTTGGGGCCTGTTAAACACCCAGTGCCT GCCCGTCTACACCAAGACGATGGACAACATCGATGTGCTAGTGATCTTGT TTCGTTTGCTTACTCGCCTGGCCCAGAATCCTGCAGAACCGGACGAAATG CTGCTGGACGAGTGCAGCCTGCTTTCCAAGCAGCTCCTAATTCCCCAGCC CACCAAGTTCAACCCCACCACGCTGCTGAGTGCCCAAGGATTCGCGGCCG TAAAGTCGGGACAGCTGCAGTTCACCTCCATGGAGGAGCCAACTTGCTTG CAGGACATGGAGACGGAGGAGGTGGTCTTCGCCAGCTCTGTGAAGGATGG CGTGAGCAATCTCCAACTGGGCGCCCGACCCAGCCACATTCGGAGATGCG CCCGCTGCGGATTCGTGTTCGTGAATAACGCCAGCAAAGTGGCCAAGACG TCGGCCCTCAAGGCGTGGTTTAGTAAGTGGCTGCACTGCCACTGTGGGGG CTTTTGGAAGCAGGTTCACTAGTAAATCTATGTGAGCAATGACCTTAGTT ATTAAGTATGATTTAAGCTTCAAATAAAAGTACATGATTGCCAGCAATTT TAGTGAAATCAAGAAATTTAATATACTAAATATATTTCTTCTTTGCACGA CGTGCTCGTTCAAAAAACTTAAGCCACAGAGAAGTCACCACCATACTTCA CTATTTCAAAACTAAATTTATTTGAATAAAATATATTTTTTAACTCTGAA AAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED16-RA | 2747 | MED16-RA | 2..2747 | 2..2747 | 13730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 18069678..18072424 | 2..2747 | 13265 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 22183147..22185892 | 2..2747 | 13730 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 22184346..22187091 | 2..2747 | 13730 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 18069677..18072387 | 1..2711 | 98 | <- | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 1..2457 | 66..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 1..2457 | 66..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 1..2457 | 66..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 1..2457 | 66..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 1..2457 | 66..2522 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 2..2747 | 2..2747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 1..2746 | 2..2747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 9..2755 | 1..2747 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 2..2747 | 2..2747 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
MED16-RA | 9..2755 | 1..2747 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22183146..22185892 | 1..2748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22183146..22185892 | 1..2748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22183146..22185892 | 1..2748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 18070651..18073397 | 1..2748 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 22184345..22187091 | 1..2748 | 99 | Plus |
Translation from 65 to 2521
> FI01002.pep MTILYKVEGKEFSKDSVFPHKKVLCSVSARNIVAFSALQSAIFPASHGGD AGDGSLPGAGLAVGASNSHVYVCDIVTPWEYYKVCSSKSLISVLQWSPNG EQLLLGYVGGRVEIWQPRNQSINLWVLQYYATVPSEDIIEAQFFQNGKGV IFNALKKDHTYYAEKFERVEQQRPTLSGFGGVASEGCVLLTSSGLLAAFS LPAIQKTSAAGADGPAHEVVELTPALHSIGISRSFIEHCSMTPSPSGALN IAFSCGWQQQLVQCFKVSLSLEGELGLEQHLAIKSESQTSIFLGPLDGRR ISHLKWTRIANEDVIFIAYACPDGAGSQLEQWTLTRRHQSVHALLQGGGG ANNKPNEFVQSESWEQVGKVQLNASLADISVTRLSVSTPDSCQVYAILQD NSVQVLEPNSMKQLNHTQFDRLSDASGAVKFVSGDLTPSSQILLIFDSHA QLYAMQAPLPKQGGSGLLLLEYCIVTGCDASDVLLLNLGNLEALVEKLTD NFTRQPSFVRHFYYANFLALKSNICRMQQQEFDNLIILHAISTTFKSLLR PSDLGFQDKGPADNLAIKLAESIPDVDTVMLNLDAKDFTVEPVMLQSLQQ LIQWVTDLALNMLHRLPEEVMKTKLSGKRPSYDISRDIVAISSLRELLVM IRIWGLLNTQCLPVYTKTMDNIDVLVILFRLLTRLAQNPAEPDEMLLDEC SLLSKQLLIPQPTKFNPTTLLSAQGFAAVKSGQLQFTSMEEPTCLQDMET EEVVFASSVKDGVSNLQLGARPSHIRRCARCGFVFVNNASKVAKTSALKA WFSKWLHCHCGGFWKQVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11654-PA | 811 | GF11654-PA | 1..811 | 1..818 | 3818 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22172-PA | 820 | GG22172-PA | 1..820 | 1..818 | 4155 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23074-PA | 848 | GH23074-PA | 1..848 | 1..818 | 2905 | 67.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED16-PA | 818 | CG5465-PA | 1..818 | 1..818 | 4224 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21142-PA | 811 | GI21142-PA | 1..811 | 1..818 | 2998 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11786-PA | 805 | GL11786-PA | 1..805 | 1..818 | 3605 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18899-PA | 805 | GA18899-PA | 1..805 | 1..818 | 3605 | 83.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15892-PA | 820 | GM15892-PA | 1..820 | 1..818 | 4267 | 97.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD11651-PA | 724 | GD11651-PA | 23..724 | 119..818 | 3650 | 97.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20989-PA | 799 | GJ20989-PA | 1..799 | 1..818 | 3054 | 71.8 | Plus |
Dvir\GJ14668-PA | 198 | GJ14668-PA | 1..187 | 143..320 | 589 | 63.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21766-PA | 832 | GK21766-PA | 1..832 | 1..818 | 2999 | 71.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14164-PA | 820 | GE14164-PA | 1..820 | 1..818 | 4216 | 95.9 | Plus |
Translation from 65 to 2521
> FI01002.hyp MTILYKVEGKEFSKDSVFPHKKVLCSVSARNIVAFSALQSAIFPASHGGD AGDGSLPGAGLAVGASNSHVYVCDIVTPWEYYKVCSSKSLISVLQWSPNG EQLLLGYVGGRVEIWQPRNQSINLWVLQYYATVPSEDIIEAQFFQNGKGV IFNALKKDHTYYAEKFERVEQQRPTLSGFGGVASEGCVLLTSSGLLAAFS LPAIQKTSAAGADGPAHEVVELTPALHSIGISRSFIEHCSMTPSPSGALN IAFSCGWQQQLVQCFKVSLSLEGELGLEQHLAIKSESQTSIFLGPLDGRR ISHLKWTRIANEDVIFIAYACPDGAGSQLEQWTLTRRHQSVHALLQGGGG ANNKPNEFVQSESWEQVGKVQLNASLADISVTRLSVSTPDSCQVYAILQD NSVQVLEPNSMKQLNHTQFDRLSDASGAVKFVSGDLTPSSQILLIFDSHA QLYAMQAPLPKQGGSGLLLLEYCIVTGCDASDVLLLNLGNLEALVEKLTD NFTRQPSFVRHFYYANFLALKSNICRMQQQEFDNLIILHAISTTFKSLLR PSDLGFQDKGPADNLAIKLAESIPDVDTVMLNLDAKDFTVEPVMLQSLQQ LIQWVTDLALNMLHRLPEEVMKTKLSGKRPSYDISRDIVAISSLRELLVM IRIWGLLNTQCLPVYTKTMDNIDVLVILFRLLTRLAQNPAEPDEMLLDEC SLLSKQLLIPQPTKFNPTTLLSAQGFAAVKSGQLQFTSMEEPTCLQDMET EEVVFASSVKDGVSNLQLGARPSHIRRCARCGFVFVNNASKVAKTSALKA WFSKWLHCHCGGFWKQVH*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
MED16-PA | 818 | CG5465-PA | 1..818 | 1..818 | 4224 | 100 | Plus |