BDGP Sequence Production Resources |
Search the DGRC for FI01003
Library: | FI |
Tissue Source: | various Drosophila melanogaster |
Created by: | |
Date Registered: | 2005-11-08 |
Comments: | Drosophila melanogaster corrected cDNA clones |
Original Plate Number: | 10 |
Well: | 3 |
Vector: | pFlc-1 |
Associated Gene/Transcript | Tfb4-RA |
Protein status: | FI01003.pep: gold |
Sequenced Size: | 1011 |
Gene | Date | Evidence |
---|---|---|
Tfb4 | 2008-04-29 | Release 5.5 accounting |
Tfb4 | 2008-08-15 | Release 5.9 accounting |
Tfb4 | 2008-12-18 | 5.12 accounting |
1011 bp (1011 high quality bases) assembled on 2006-09-12
GenBank Submission: BT025234
> FI01003.complete CTGTAGCGATAACATTGCCGGCGAAAATGGAAGCAGATCAAGCAGCAAGC AAGGAAGCCGAATCATGCATCGACCTCTTGGTGATCGTCCTGGACACGAA CCCCTCCCAGCACTTCGTGCGCCAGAACCCACAGAACCTCACGCAAATCC TGGAGGCGGTGATTGCCTTTGGGAATGCTCACCTGATGCAGAAGGCCCAG AACAAACTGGCTGTGGTATCCTGCTCCCACCATGCCACAAACTTCCTGTA TCCGCTGCCCAGAAGACAAGTGGAACTGCGCCAAGTGGATGGGCAGTACG AGGCGTTTAATCTGGTGGAGAAGACGGTGAAGCAGCAGCTGGGCAGCATC CTGATGAACGCACCACGGCTCAGCGCTCCTTGTGAGAGTCTCCTGGCCGG CAGCATGTCCATGGCGCTGTGCTACATATCAAGGCTCCAGAGGAATCTGG CTCCTGGCGTCAAGATGCATTCCCGCATCCTGGTCGTCACAGGCAGCAAC GAGTGCGCCTCGCAGTACATGACGTTCATGAACGTCTTCTTCACCGCCCA GAAACTGGGCATCACGATCGATACCTGCGCCCTGGACAAGACCCTCAGTT TGCTACAGCAAGGCTGTGACATTACCTCCGGACAGTTCCTCAAGGTCACC CAGCTGGACGGCCTGCTGCAGTACCTCCTGTGGGTCTTCCTGCCCGCCCC GCAGATCCGTCACAAATTGGTCCTGCCGCCACCGCCCAAAGTGGACTACC GCGCCTCCTGCTTCTGCCATCGTGAGCTGATCGACATTGGCTACGTCTGC TCGGTTTGCCTCTCGGTCTTCTGCAAATACAGTCCCATATGCACCACTTG CCACACCATTTTCAAGAATCCCGGTCCTCTGCCCATCAAGGGCAAAAAGA AAAAGAAGACCGACAAGCAAATGTAATTCCAGCAGTAGAAAATACTGGTT ACCAAAGGAAGCAGTATGTTAAATATAAAGGTACCTTTTTAGTTTAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tfb4-RA | 1031 | Tfb4-RA | 40..1031 | 4..995 | 4960 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 1149568..1149987 | 853..434 | 2085 | 99.8 | Minus |
chr2L | 23010047 | chr2L | 1150048..1150243 | 434..239 | 950 | 99 | Minus |
chr2L | 23010047 | chr2L | 1150296..1150478 | 238..56 | 870 | 98.4 | Minus |
chr2L | 23010047 | chr2L | 1149362..1149503 | 995..854 | 710 | 100 | Minus |
chr2L | 23010047 | chr2L | 1150534..1150587 | 57..4 | 240 | 96.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1149651..1150070 | 853..434 | 2100 | 100 | Minus |
2L | 23513712 | 2L | 1150131..1150326 | 434..239 | 980 | 100 | Minus |
2L | 23513712 | 2L | 1150379..1150561 | 238..56 | 915 | 100 | Minus |
2L | 23513712 | 2L | 1149444..1149586 | 996..854 | 715 | 100 | Minus |
2L | 23513712 | 2L | 1150617..1150670 | 57..4 | 270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 1149651..1150070 | 853..434 | 2100 | 100 | Minus |
2L | 23513712 | 2L | 1150131..1150326 | 434..239 | 980 | 100 | Minus |
2L | 23513712 | 2L | 1150379..1150561 | 238..56 | 915 | 100 | Minus |
2L | 23513712 | 2L | 1149444..1149586 | 996..854 | 715 | 100 | Minus |
2L | 23513712 | 2L | 1150617..1150670 | 57..4 | 270 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Tv1 | 6868 | Dvir\Tv1 6868bp Derived from AF056940 (Rel. 62, Last updated, Version 4). | 4887..4984 | 885..974 | 120 | 63.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 1149362..1149503 | 854..995 | 100 | <- | Minus |
chr2L | 1149568..1149986 | 435..853 | 99 | <- | Minus |
chr2L | 1150048..1150243 | 239..434 | 98 | <- | Minus |
chr2L | 1150296..1150476 | 58..238 | 98 | <- | Minus |
chr2L | 1150534..1150590 | 1..57 | 94 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..900 | 27..926 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..900 | 27..926 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..900 | 27..926 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..900 | 27..926 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..900 | 27..926 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..995 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..995 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 5..999 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 1..995 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Tfb4-RA | 5..999 | 1..995 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1149445..1149586 | 854..995 | 100 | <- | Minus |
2L | 1149651..1150069 | 435..853 | 100 | <- | Minus |
2L | 1150131..1150326 | 239..434 | 100 | <- | Minus |
2L | 1150379..1150559 | 58..238 | 100 | <- | Minus |
2L | 1150617..1150673 | 1..57 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1149445..1149586 | 854..995 | 100 | <- | Minus |
2L | 1149651..1150069 | 435..853 | 100 | <- | Minus |
2L | 1150131..1150326 | 239..434 | 100 | <- | Minus |
2L | 1150379..1150559 | 58..238 | 100 | <- | Minus |
2L | 1150617..1150673 | 1..57 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1149445..1149586 | 854..995 | 100 | <- | Minus |
2L | 1149651..1150069 | 435..853 | 100 | <- | Minus |
2L | 1150131..1150326 | 239..434 | 100 | <- | Minus |
2L | 1150379..1150559 | 58..238 | 100 | <- | Minus |
2L | 1150617..1150673 | 1..57 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 1149445..1149586 | 854..995 | 100 | <- | Minus |
arm_2L | 1149651..1150069 | 435..853 | 100 | <- | Minus |
arm_2L | 1150131..1150326 | 239..434 | 100 | <- | Minus |
arm_2L | 1150379..1150559 | 58..238 | 100 | <- | Minus |
arm_2L | 1150617..1150673 | 1..57 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 1149651..1150069 | 435..853 | 100 | <- | Minus |
2L | 1150131..1150326 | 239..434 | 100 | <- | Minus |
2L | 1150379..1150559 | 58..238 | 100 | <- | Minus |
2L | 1150617..1150673 | 1..57 | 98 | Minus | |
2L | 1149445..1149586 | 854..995 | 100 | <- | Minus |
Translation from 2 to 925
> FI01003.hyp LAITLPAKMEADQAASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQIL EAVIAFGNAHLMQKAQNKLAVVSCSHHATNFLYPLPRRQVELRQVDGQYE AFNLVEKTVKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLA PGVKMHSRILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSL LQQGCDITSGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYR ASCFCHRELIDIGYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKK KKTDKQM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tfb4-PA | 299 | CG5041-PA | 1..299 | 9..307 | 1564 | 100 | Plus |
Translation from 26 to 925
> FI01003.pep MEADQAASKEAESCIDLLVIVLDTNPSQHFVRQNPQNLTQILEAVIAFGN AHLMQKAQNKLAVVSCSHHATNFLYPLPRRQVELRQVDGQYEAFNLVEKT VKQQLGSILMNAPRLSAPCESLLAGSMSMALCYISRLQRNLAPGVKMHSR ILVVTGSNECASQYMTFMNVFFTAQKLGITIDTCALDKTLSLLQQGCDIT SGQFLKVTQLDGLLQYLLWVFLPAPQIRHKLVLPPPPKVDYRASCFCHRE LIDIGYVCSVCLSVFCKYSPICTTCHTIFKNPGPLPIKGKKKKKTDKQM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14734-PA | 297 | GF14734-PA | 1..286 | 1..287 | 1436 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24611-PA | 299 | GG24611-PA | 1..299 | 1..299 | 1573 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10566-PA | 300 | GH10566-PA | 4..282 | 3..281 | 1379 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Tfb4-PA | 299 | CG5041-PA | 1..299 | 1..299 | 1564 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21952-PA | 299 | GI21952-PA | 1..286 | 1..285 | 1363 | 88.8 | Plus |
Dmoj\GI10128-PA | 334 | GI10128-PA | 27..306 | 16..285 | 494 | 36.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15043-PA | 298 | GL15043-PA | 1..287 | 1..287 | 1426 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18615-PA | 298 | GA18615-PA | 1..287 | 1..287 | 1440 | 92 | Plus |
Dpse\GA22626-PA | 390 | GA22626-PA | 26..311 | 1..275 | 262 | 28.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16625-PA | 299 | GM16625-PA | 1..299 | 1..299 | 1586 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22925-PA | 299 | GD22925-PA | 1..299 | 1..299 | 1590 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17829-PA | 300 | GJ17829-PA | 1..281 | 1..280 | 1372 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK24367-PA | 303 | GK24367-PA | 14..292 | 8..286 | 1337 | 86.7 | Plus |
Dwil\GK25630-PA | 310 | GK25630-PA | 46..307 | 16..263 | 418 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15755-PA | 299 | GE15755-PA | 1..299 | 1..299 | 1585 | 98.7 | Plus |